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Fixes #1258 install dependencies from Github #1259

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merged 12 commits into from
Aug 12, 2024
+11 −11
Merged

Fixes #1258 install dependencies from Github #1259

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4777aee
Fixes #1258 install dependencies from Github
pchelle Jul 29, 2024
144302f
Trigger appveyor build
pchelle Jul 30, 2024
38e68a5
Add github pat in environment
pchelle Jul 30, 2024
08007af
Revert "Add github pat in environment"
pchelle Jul 30, 2024
ad87b95
Check if unsetting the PAT works in using install github
pchelle Jul 30, 2024
54b5b58
Revert "Check if unsetting the PAT works in using install github"
pchelle Aug 1, 2024
c4e06f8
Use pak instead of remotes
pchelle Aug 1, 2024
3740d9b
Use release archives
pchelle Aug 6, 2024
d209dbc
zip archives are directly packages
pchelle Aug 9, 2024
8aa67c4
Download and package name should match for installation
pchelle Aug 9, 2024
b1b7373
Use develop version for utils
pchelle Aug 12, 2024
efe9619
Use develop version of tlf
pchelle Aug 12, 2024
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20 changes: 10 additions & 10 deletions .github/workflows/install_dependencies.R
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Original file line number Diff line number Diff line change
@@ -1,15 +1,15 @@
install.packages(c('dplyr','purrr','covr','readr','tidyr','webshot','spelling','readxl','data.table','gridtext','ggtext','tidyselect','testthat','rmarkdown','pkgdown','openxlsx'), repos = 'http://cran.us.r-project.org', type='win.binary')
download.file('https://github.com/Open-Systems-Pharmacology/rSharp/releases/download/v1.0.0/rSharp-v1.0.0-Windows-r_4.4.0.zip', destfile = "rsharp.zip", mode = "wb")
download.file('https://ci.appveyor.com/api/projects/open-systems-pharmacology-ci/ospsuite-rutils/artifacts/ospsuite.utils.zip?pr=false', destfile = 'ospsuite.utils.zip', mode='wb')
download.file('https://ci.appveyor.com/api/projects/open-systems-pharmacology-ci/tlf-library/artifacts/tlf.zip?pr=false', destfile = 'tlf.zip', mode='wb')
download.file('https://github.com/Open-Systems-Pharmacology/OSPSuite-R/releases/download/v12.1.0/ospsuite_12.1.0.zip', destfile = "ospsuite.zip", mode = "wb")
unzip("rsharp.zip")
rSharp_archive <- list.files( pattern = "rSharp.*\\.zip")
install.packages(rSharp_archive, repos = NULL, type = "binary")
unlink(c("rsharp.zip", rSharp_archive))
download.file('https://ci.appveyor.com/api/projects/open-systems-pharmacology-ci/ospsuite-rutils/artifacts/ospsuite.utils.zip?pr=false', destfile = 'ospsuite.utils.zip', mode='wb')
install.packages('ospsuite.utils.zip', repos = NULL, type = 'binary')
unlink('ospsuite.utils.zip')
download.file('https://ci.appveyor.com/api/projects/open-systems-pharmacology-ci/tlf-library/artifacts/tlf.zip?pr=false', destfile = 'tlf.zip', mode='wb')
install.packages('tlf.zip', repos = NULL, type = 'binary')
unlink('tlf.zip')
download.file('https://ci.appveyor.com/api/projects/open-systems-pharmacology-ci/ospsuite-r-rsharp/artifacts/ospsuite.zip?pr=false', destfile = 'ospsuite.zip', mode='wb')
install.packages('ospsuite.zip', repos = NULL, type = 'binary')
unlink('ospsuite.zip')
install.packages("ospsuite.utils.zip", repos = NULL, type = "binary")
install.packages("tlf.zip", repos = NULL, type = "binary")
install.packages("ospsuite.zip", repos = NULL, type = "binary")
unlink("rsharp.zip")
unlink("ospsuite-utils.zip")
unlink("tlf.zip")
unlink("ospsuite.zip")
2 changes: 1 addition & 1 deletion appveyor.yml
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Expand Up @@ -74,7 +74,7 @@ skip_commits:
- .github/workflows/*.yml
- .github/workflows/*.sh
- .github/workflows/Dockerfile
- .github/workflows/*.R
# - .github/workflows/*.R
- '_pkgdown.yml'

skip_branch_with_pr: true
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