python3Packages.qiskit: 0.25.0 -> 0.26.2

pkgs/development/python-modules/qiskit-aer/default.nix

@@ -2,6 +2,7 @@
 , pythonOlder
 , buildPythonPackage
 , fetchFromGitHub
+, fetchpatch
   # C Inputs
 , blas
 , catch2
@@ -27,7 +28,7 @@
 
 buildPythonPackage rec {
   pname = "qiskit-aer";
-  version = "0.8.0";
+  version = "0.8.2";
   format = "pyproject";
 
   disabled = pythonOlder "3.6";
@@ -36,13 +37,30 @@ buildPythonPackage rec {
     owner = "Qiskit";
     repo = "qiskit-aer";
     rev = version;
-    hash = "sha256-CWF3ehLs0HBXnYH11r+2CQwIcxddAfQm3ulAf1agl/o=";
+    hash = "sha256-7NWM7qpMQ3vA6p0dhEPnkBjsPMdhceYTYcAD4tsClf0=";
   };
 
+  patches = [
+    (fetchpatch {
+      # https://github.com/Qiskit/qiskit-aer/pull/1250
+      name = "qiskit-aer-pr-1250-native-cmake_dl_libs.patch";
+      url = "https://github.com/Qiskit/qiskit-aer/commit/2bf04ade3e5411776817706cf82cc67a3b3866f6.patch";
+      sha256 = "0ldwzxxfgaad7ifpci03zfdaj0kqj0p3h94qgshrd2953mf27p6z";
+    })
+  ];
+  # Remove need for cmake python package
+  # pybind11 shouldn't be an install requirement, just build requirement.
+  postPatch = ''
+    substituteInPlace setup.py \
+      --replace "'cmake!=3.17,!=3.17.0'," "" \
+      --replace "'pybind11>=2.6'" ""
+  '';
+
   nativeBuildInputs = [
     cmake
     ninja
     scikit-build
+    pybind11
   ];
 
   buildInputs = [
@@ -58,14 +76,8 @@ buildPythonPackage rec {
     cvxpy
     cython  # generates some cython files at runtime that need to be cython-ized
     numpy
-    pybind11
   ];
 
-  # tries to install pypi cmake package, not needed
-  postPatch = ''
-    substituteInPlace setup.py --replace "'cmake!=3.17,!=3.17.0'," ""
-  '';
-
   # Disable using conan for build
   preBuild = ''
     export DISABLE_CONAN=1

pkgs/development/python-modules/qiskit-aqua/default.nix

@@ -10,7 +10,6 @@
 , networkx
 , numpy
 , psutil
-, python
 , qiskit-ignis
 , qiskit-terra
 , quandl
@@ -34,7 +33,7 @@
 
 buildPythonPackage rec {
   pname = "qiskit-aqua";
-  version = "0.9.0";
+  version = "0.9.1";
 
   disabled = pythonOlder "3.6";
 
@@ -43,7 +42,7 @@ buildPythonPackage rec {
     owner = "Qiskit";
     repo = "qiskit-aqua";
     rev = version;
-    hash = "sha256-knue9uJih72UQHsvfXZ9AA94mol4ERa9Lo/GMcp+2hA=";
+    hash = "sha256-fptyqPrkUgl3UjtlEmDYORdX/SsONxWozQGEs/EahmU=";
   };
 
   # Optional packages: pyscf (see below NOTE) & pytorch. Can install via pip/nix if needed.
@@ -97,8 +96,6 @@ buildPythonPackage rec {
       >> qiskit/optimization/__init__.py
   '';
 
-  postInstall = "rm -rf $out/${python.sitePackages}/docs";  # Remove docs dir b/c it can cause conflicts.
-
   checkInputs = [
     pytestCheckHook
     ddt
@@ -123,9 +120,6 @@ buildPythonPackage rec {
     "--ignore=test/chemistry/test_bopes_sampler.py"
   ];
   disabledTests = [
-    # Disabled due to missing pyscf
-    "test_validate" # test/chemistry/test_inputparser.py
-
     # Online tests
     "test_exchangedata"
     "test_yahoo"
@@ -163,6 +157,8 @@ buildPythonPackage rec {
     "test_eoh"
     "test_qasm_5"
     "test_uccsd_hf"
+  ] ++ lib.optionals (!withPyscf) [
+    "test_validate" # test/chemistry/test_inputparser.py
   ];
 
   meta = with lib; {

pkgs/development/python-modules/qiskit-ibmq-provider/default.nix

@@ -39,15 +39,15 @@ let
 in
 buildPythonPackage rec {
   pname = "qiskit-ibmq-provider";
-  version = "0.12.2";
+  version = "0.13.1";
 
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "Qiskit";
     repo = pname;
     rev = version;
-    sha256 = "0yil363mqssq0453nrwxgkjivzk3a4jgbnaf21bp7lwfcl2jdhqm";
+    hash = "sha256-DlHlXncttzGo4uVoh2aQ7urW6krN3ej2sJ/EwuxeF2I=";
   };
 
   propagatedBuildInputs = [
@@ -83,7 +83,9 @@ buildPythonPackage rec {
 
   # Skip tests that rely on internet access (mostly to IBM Quantum Experience cloud).
   # Options defined in qiskit.terra.test.testing_options.py::get_test_options
-  QISKIT_TESTS = "skip_online";
+  preCheck = ''
+    export QISKIT_TESTS=skip_online
+  '';
 
   meta = with lib; {
     description = "Qiskit provider for accessing the quantum devices and simulators at IBMQ";

pkgs/development/python-modules/qiskit-ignis/default.nix

@@ -1,8 +1,8 @@
 { lib
+, stdenv
 , pythonOlder
 , buildPythonPackage
 , fetchFromGitHub
-, python
 , numpy
 , qiskit-terra
 , scikit-learn
@@ -35,12 +35,6 @@ buildPythonPackage rec {
     hash = "sha256-L5fwCMsN03ojiDvKIyqsGfUnwej1P7bpyHlL6mu7nh0=";
   };
 
-  # hacky, fix https://github.com/Qiskit/qiskit-ignis/issues/532.
-  # TODO: remove on qiskit-ignis v0.5.2
-  postPatch = ''
-    substituteInPlace qiskit/ignis/mitigation/expval/base_meas_mitigator.py --replace "plt.axes" "'plt.axes'"
-  '';
-
   propagatedBuildInputs = [
     numpy
     qiskit-terra
@@ -49,12 +43,13 @@ buildPythonPackage rec {
   ] ++ lib.optionals (withCvx) [ cvxpy ]
   ++ lib.optionals (withVisualization) [ matplotlib ]
   ++ lib.optionals (withJit) [ numba ];
-  postInstall = "rm -rf $out/${python.sitePackages}/docs"; # this dir can create conflicts
 
   # Tests
   pythonImportsCheck = [ "qiskit.ignis" ];
   dontUseSetuptoolsCheck = true;
-  preCheck = "export HOME=$TMPDIR";
+  preCheck = ''
+    export HOME=$TMPDIR
+  '';
   checkInputs = [
     pytestCheckHook
     ddt
@@ -63,7 +58,8 @@ buildPythonPackage rec {
   ];
   disabledTests = [
     "test_tensored_meas_cal_on_circuit" # Flaky test, occasionally returns result outside bounds
-    "test_qv_fitter" # execution hangs, ran for several minutes
+  ] ++ lib.optionals stdenv.isAarch64 [
+    "test_fitters" # Fails check that arrays are close. Might be due to aarch64 math issues.
   ];
 
   meta = with lib; {

pkgs/development/python-modules/qiskit-terra/default.nix

@@ -1,4 +1,5 @@
 { lib
+, stdenv
 , pythonOlder
 , buildPythonPackage
 , fetchFromGitHub
@@ -56,15 +57,15 @@ in
 
 buildPythonPackage rec {
   pname = "qiskit-terra";
-  version = "0.17.0";
+  version = "0.17.4";
 
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "Qiskit";
     repo = pname;
     rev = version;
-    hash = "sha256-LbNbaHAWAVG5YLc9juuwcOlrREBW6OjEl7VPtACfl3I=";
+    hash = "sha256-JyNuke+XPqjLVZbvPud9Y7k0+EmvETVKcOYcDldBiVo=";
   };
 
   nativeBuildInputs = [ cython ];
@@ -106,11 +107,17 @@ buildPythonPackage rec {
     "test/python/classical_function_compiler/"
   ];
   disabledTests = [
+    # Not working on matplotlib >= 3.4.0, checks images match.
+    "test_plot_circuit_layout"
+
     # Flaky tests
     "test_cx_equivalence"
     "test_pulse_limits"
+    "test_1q_random"
   ] ++ lib.optionals (!withClassicalFunctionCompiler) [
     "TestPhaseOracle"
+  ] ++ lib.optionals stdenv.isAarch64 [
+    "test_circuit_init" # failed on aarch64, https://gist.github.com/r-rmcgibbo/c2e173d43ced4f6954811004f6b5b842
   ]
   # Disabling slow tests for build constraints
   ++ [
@@ -155,8 +162,8 @@ buildPythonPackage rec {
     pushd $PACKAGEDIR
   '';
   postCheck = ''
-    rm -rf test
-    rm -rf examples
+    rm -r test
+    rm -r examples
     popd
   '';
 

pkgs/development/python-modules/qiskit/default.nix

@@ -15,15 +15,15 @@
 buildPythonPackage rec {
   pname = "qiskit";
   # NOTE: This version denotes a specific set of subpackages. See https://qiskit.org/documentation/release_notes.html#version-history
-  version = "0.25.0";
+  version = "0.26.2";
 
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "qiskit";
     repo = "qiskit";
     rev = version;
-    hash = "sha256-pJM6d3AyFs9AexvQXG+8QQ4zwpFisJC16iBFR9gNSk0=";
+    hash = "sha256-QYWKKS7e/uCt5puWV4jA9Emp7M4Cyv2RUCxilbChWhw=";
   };
 
   propagatedBuildInputs = [

pkgs/development/python-modules/retworkx/default.nix

@@ -1,41 +1,53 @@
 { lib
+, stdenv
 , buildPythonPackage
 , pythonOlder
 , rustPlatform
 , fetchFromGitHub
-
+, libiconv
   # Check inputs
 , pytestCheckHook
+, fixtures
+, graphviz
+, matplotlib
 , networkx
 , numpy
+, pydot
 }:
 
 buildPythonPackage rec {
   pname = "retworkx";
-  version = "0.8.0";
+  version = "0.9.0";
   format = "pyproject";
   disabled = pythonOlder "3.6";
 
   src = fetchFromGitHub {
     owner = "Qiskit";
     repo = "retworkx";
     rev = version;
-    sha256 = "0plpri6a3d6f1000kmcah9066vq2i37d14bdf8sm96493fhpqhrd";
+    hash = "sha256-1W7DexS+ECAPsxyZAF36xcEguFkjUMX9lDBylNVPqyk=";
   };
 
   cargoDeps = rustPlatform.fetchCargoTarball {
     inherit src;
     name = "${pname}-${version}";
-    hash = "sha256-+k779gmge8wDdoZrWn9ND47kUqt7pqe75Zuj2Byfefo=";
+    hash = "sha256-y5l7jqrlk3ONHefZPS31IvcaO9ttXWLM7fIUmNVwbco=";
   };
 
   nativeBuildInputs = with rustPlatform; [ cargoSetupHook maturinBuildHook ];
 
-  # Needed b/c need to check AFTER python wheel is installed (using Rust Build, not buildPythonPackage)
-  doCheck = false;
-  doInstallCheck = true;
+  buildInputs = lib.optionals stdenv.isDarwin [ libiconv ];
 
-  installCheckInputs = [ pytestCheckHook networkx numpy ];
+  pythonImportsCheck = [ "retworkx" ];
+  checkInputs = [
+    pytestCheckHook
+    fixtures
+    graphviz
+    matplotlib
+    networkx
+    numpy
+    pydot
+  ];
 
   preCheck = ''
     export TESTDIR=$(mktemp -d)

pkgs/development/python-modules/yfinance/default.nix

@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "yfinance";
-  version = "0.1.56";
+  version = "0.1.59";
 
   # GitHub source releases aren't tagged
   src = fetchPypi {
     inherit pname version;
-    sha256 = "a6d4c7b939fdd48d983556501f5b387e20aaef86afc8e6ba6f91a49a7e22d2dd";
+    sha256 = "fe4dc46807eceadc6604bf51ece7297b752dc5402a38a87385094fbfc7565fa0";
   };
 
   propagatedBuildInputs = [