Merge pull request #79293 from NixOS/staging-next

Staging next (with glibc 2.30)
NixOS · Feb 9, 2020 · 3846896 · 3846896
2 parents fa74455 + 531a48e
commit 3846896
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diff --git a/pkgs/applications/audio/distrho/default.nix b/pkgs/applications/audio/distrho/default.nix
@@ -26,7 +26,7 @@ in stdenv.mkDerivation rec {
     runHook postConfigure
   '';
 
-  patchPhase = ''
+  postPatch = ''
     sed -e "s#@./scripts#sh scripts#" -i Makefile
   '';
 

diff --git a/pkgs/applications/misc/gcal/default.nix b/pkgs/applications/misc/gcal/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, ncurses  }:
+{ stdenv, fetchurl, ncurses, fetchpatch }:
 
 stdenv.mkDerivation rec {
   pname = "gcal";
@@ -9,6 +9,13 @@ stdenv.mkDerivation rec {
     sha256 = "1av11zkfirbixn05hyq4xvilin0ncddfjqzc4zd9pviyp506rdci";
   };
 
+  patches = [
+    (fetchpatch {
+      url = "https://src.fedoraproject.org/rpms/gcal/raw/master/f/gcal-glibc-no-libio.patch";
+      sha256 = "0l4nw9kgzsay32rsdwvs75pbp4fhx6pfm85paynfbd20cdm2n2kv";
+    })
+  ];
+
   enableParallelBuilding = true;
 
   buildInputs = [ ncurses ];

diff --git a/pkgs/applications/misc/spacefm/default.nix b/pkgs/applications/misc/spacefm/default.nix
@@ -13,6 +13,8 @@ stdenv.mkDerivation rec {
     sha256 = "089r6i40lxcwzp60553b18f130asspnzqldlpii53smz52kvpirx";
   };
 
+  patches = [ ./glibc-fix.patch ];
+
   configureFlags = [
     "--with-bash-path=${pkgs.bash}/bin/bash"
   ];

diff --git a/pkgs/applications/misc/spacefm/glibc-fix.patch b/pkgs/applications/misc/spacefm/glibc-fix.patch
@@ -0,0 +1,12 @@
+diff --git a/src/main.c b/src/main.c
+index 27f5614..2b45708 100644
+--- a/src/main.c
++++ b/src/main.c
+@@ -23,6 +23,7 @@
+ #include <sys/types.h>
+ #include <sys/socket.h>
+ #include <sys/un.h>
++#include <sys/sysmacros.h>
+
+ #include <signal.h>
+
diff --git a/pkgs/applications/misc/ssw/default.nix b/pkgs/applications/misc/ssw/default.nix
@@ -0,0 +1,21 @@
+{ stdenv, fetchurl, pkg-config, gtk3 }:
+
+stdenv.mkDerivation rec {
+  pname = "ssw";
+  version = "0.3";
+
+  src = fetchurl {
+    url = "https://alpha.gnu.org/gnu/ssw/spread-sheet-widget-${version}.tar.gz";
+    sha256 = "1h93yyh2by6yrmkwqg38nd5knids05k5nqzcihc1hdwgzg3c4b8y";
+  };
+
+  nativeBuildInputs = [ pkg-config ];
+  buildInputs = [ gtk3 ];
+
+  meta = with stdenv.lib; {
+    homepage = "https://www.gnu.org/software/ssw/";
+    license = licenses.gpl3;
+    description = "GNU Spread Sheet Widget";
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/applications/misc/vit/default.nix b/pkgs/applications/misc/vit/default.nix
@@ -1,7 +1,8 @@
 { lib
 , python3Packages
+, taskwarrior
 , glibcLocales
-, taskwarrior }:
+}:
 
 with python3Packages;
 
@@ -21,6 +22,7 @@ buildPythonApplication rec {
     tzlocal
     urwid
   ];
+
   checkInputs = [ glibcLocales ];
 
   makeWrapperArgs = [ "--suffix" "PATH" ":" "${taskwarrior}/bin" ];

diff --git a/pkgs/applications/science/math/pspp/default.nix b/pkgs/applications/science/math/pspp/default.nix
@@ -1,20 +1,23 @@
 { stdenv, fetchurl, libxml2, readline, zlib, perl, cairo, gtk3, gsl
 , pkgconfig, gtksourceview, pango, gettext, dconf
 , makeWrapper, gsettings-desktop-schemas, hicolor-icon-theme
+, texinfo, ssw
 }:
 
 stdenv.mkDerivation rec {
-  name = "pspp-1.0.1";
+  pname = "pspp";
+  version = "1.2.0";
 
   src = fetchurl {
-    url = "mirror://gnu/pspp/${name}.tar.gz";
-    sha256 = "1r8smr5057993h90nx0mdnff8nxw9x546zzh6qpy4h3xblp1la5s";
+    url = "mirror://gnu/pspp/${pname}-${version}.tar.gz";
+    sha256 = "07pp27zycrb5x927jwaj9r3q7hy915jh51xs85zxby6gfiwl63m5";
   };
 
-  nativeBuildInputs = [ pkgconfig ];
+  nativeBuildInputs = [ pkgconfig texinfo ];
   buildInputs = [ libxml2 readline zlib perl cairo gtk3 gsl
     gtksourceview pango gettext
-    makeWrapper gsettings-desktop-schemas hicolor-icon-theme ];
+    makeWrapper gsettings-desktop-schemas hicolor-icon-theme ssw
+  ];
 
   doCheck = false;
 

diff --git a/pkgs/applications/virtualization/xen/4.8.nix b/pkgs/applications/virtualization/xen/4.8.nix
@@ -185,7 +185,10 @@ callPackage (import ./generic.nix (rec {
     # Avoid a glibc >= 2.25 deprecation warnings that get fatal via -Werror.
     sed 1i'#include <sys/sysmacros.h>' \
       -i tools/blktap2/control/tap-ctl-allocate.c \
-      -i tools/libxl/libxl_device.c
+      -i tools/libxl/libxl_device.c \
+      ${optionalString withInternalQemu "-i tools/qemu-xen/hw/9pfs/9p.c"}
+
+    sed -i -e '/sys\/sysctl\.h/d' tools/blktap2/drivers/block-remus.c
   '';
 
   passthru.qemu-system-i386 = if withInternalQemu

diff --git a/pkgs/development/compilers/mono/4.nix b/pkgs/development/compilers/mono/4.nix
@@ -5,4 +5,5 @@ callPackage ./generic.nix ({
   version = "4.8.1.0";
   sha256 = "1vyvp2g28ihcgxgxr8nhzyzdmzicsh5djzk8dk1hj5p5f2k3ijqq";
   enableParallelBuilding = false; # #32386, https://hydra.nixos.org/build/65600645
+  extraPatches = [ ./mono4-glibc.patch ];
 })
diff --git a/pkgs/development/compilers/mono/generic.nix b/pkgs/development/compilers/mono/generic.nix
@@ -1,6 +1,7 @@
 { stdenv, fetchurl, bison, pkgconfig, glib, gettext, perl, libgdiplus, libX11, callPackage, ncurses, zlib, withLLVM ? false, cacert, Foundation, libobjc, python, version, sha256, autoconf, libtool, automake, cmake, which
 , enableParallelBuilding ? true
 , srcArchiveSuffix ? "tar.bz2"
+, extraPatches ? []
 }:
 
 let
@@ -41,7 +42,7 @@ stdenv.mkDerivation rec {
 
   # We want pkg-config to take priority over the dlls in the Mono framework and the GAC
   # because we control pkg-config
-  patches = [ ./pkgconfig-before-gac.patch ];
+  patches = [ ./pkgconfig-before-gac.patch ] ++ extraPatches;
 
   # Patch all the necessary scripts. Also, if we're using LLVM, we fix the default
   # LLVM path to point into the Mono LLVM build, since it's private anyway.

diff --git a/pkgs/development/compilers/mono/mono4-glibc.patch b/pkgs/development/compilers/mono/mono4-glibc.patch
@@ -0,0 +1,12 @@
+diff --git a/mono/io-layer/processes.c b/mono/io-layer/processes.c
+index 53c271a4..84bd3252 100644
+--- a/mono/io-layer/processes.c
++++ b/mono/io-layer/processes.c
+@@ -19,6 +19,7 @@
+ #include <errno.h>
+ #include <sys/types.h>
+ #include <sys/stat.h>
++#include <sys/sysmacros.h>
+ #include <unistd.h>
+ #ifdef HAVE_SIGNAL_H
+ #include <signal.h>
diff --git a/pkgs/development/compilers/wcc/default.nix b/pkgs/development/compilers/wcc/default.nix
@@ -17,6 +17,8 @@ stdenv.mkDerivation {
   postPatch = ''
     sed -i src/wsh/include/libwitch/wsh.h src/wsh/scripts/INDEX \
       -e "s#/usr/share/wcc#$out/share/wcc#"
+
+    sed -i -e '/stropts.h>/d' src/wsh/include/libwitch/wsh.h
   '';
 
   installFlags = [ "DESTDIR=$(out)" ];

diff --git a/pkgs/development/compilers/z88dk/default.nix b/pkgs/development/compilers/z88dk/default.nix
@@ -1,14 +1,14 @@
 { fetchFromGitHub, stdenv, makeWrapper, unzip, libxml2, m4, uthash, which }:
 
 stdenv.mkDerivation rec {
-  pname = "z88dk";
-  version = "unstable-2019-05-09";
+  pname = "z88dk-unstable";
+  version = "2020-01-27";
 
   src = fetchFromGitHub {
     owner = "z88dk";
     repo  = "z88dk";
-    rev = "826d68632c3a7c17df88dd2ec54571a6041da69c";
-    sha256 = "104qgb01sdb97mkcxnq1cdlqi5qvjm4rd9bg5r42pdfz81ss49xj";
+    rev = "efdd07c2e2229cac7cfef97ec01f478004846e39";
+    sha256 = "0jcks5ygp256lmzmllffp4yb38cxjgdyqnnimkj4s65095cfasyb";
     fetchSubmodules = true;
   };
 

diff --git a/pkgs/development/interpreters/python/cpython/3.7/darwin-libutil.patch b/pkgs/development/interpreters/python/cpython/3.7/darwin-libutil.patch
@@ -0,0 +1,23 @@
+diff --git a/Modules/posixmodule.c b/Modules/posixmodule.c
+index c3682b4..16826c6 100644
+--- a/Modules/posixmodule.c
++++ b/Modules/posixmodule.c
+@@ -5880,15 +5880,13 @@ error:
+ #if defined(HAVE_OPENPTY) || defined(HAVE_FORKPTY) || defined(HAVE_DEV_PTMX)
+ #ifdef HAVE_PTY_H
+ #include <pty.h>
+-#else
++#endif
+ #ifdef HAVE_LIBUTIL_H
+ #include <libutil.h>
+-#else
++#endif
+ #ifdef HAVE_UTIL_H
+ #include <util.h>
+-#endif /* HAVE_UTIL_H */
+-#endif /* HAVE_LIBUTIL_H */
+-#endif /* HAVE_PTY_H */
++#endif
+ #ifdef HAVE_STROPTS_H
+ #include <stropts.h>
+ #endif
diff --git a/pkgs/development/interpreters/python/cpython/default.nix b/pkgs/development/interpreters/python/cpython/default.nix
@@ -103,10 +103,7 @@ in with passthru; stdenv.mkDerivation {
     ./3.5/ld_library_path.patch
   ] ++ optionals (isPy37 || isPy38) [
     # Fix darwin build https://bugs.python.org/issue34027
-    (fetchpatch {
-      url = https://bugs.python.org/file47666/darwin-libutil.patch;
-      sha256 = "0242gihnw3wfskl4fydp2xanpl8k5q7fj4dp7dbbqf46a4iwdzpa";
-    })
+    ./3.7/darwin-libutil.patch
   ] ++ optionals (isPy3k && hasDistutilsCxxPatch) [
     # Fix for http://bugs.python.org/issue1222585
     # Upstream distutils is calling C compiler to compile C++ code, which

diff --git a/pkgs/development/libraries/c-blosc/default.nix b/pkgs/development/libraries/c-blosc/default.nix
@@ -2,13 +2,13 @@
 
 stdenv.mkDerivation rec {
   pname = "c-blosc";
-  version = "1.17.0";
+  version = "1.17.1";
 
   src = fetchFromGitHub {
     owner = "Blosc";
     repo = "c-blosc";
     rev = "v${version}";
-    sha256 = "0c4vh7kyxm57jclk8jlcnc11w7nd2m81qk454gav58aji85w16hg";
+    sha256 = "1asp3xmbvdnz1mj1pl1ykzz61cybvkxz3cdn43zh1z0x1qlgwm80";
   };
 
   buildInputs = [ cmake ];

diff --git a/pkgs/development/libraries/glibc/CVE-2018-11236.patch b/pkgs/development/libraries/glibc/CVE-2018-11236.patch