Test yaml-cpp parser

.github/workflows/test-yamlcpp-off.yml

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+name: Build/test Mini-EM (yaml-cpp off)
+
+# Trigger the workflow on push or pull request
+on:
+  pull_request:
+    branches:
+      - develop
+      - NGA-FY23-develop
+  workflow_dispatch:
+
+# Cancel any existing jobs
+concurrency:
+  group: ${{ github.event.repository.name }}-${{ github.ref }}-${{ github.workflow }}
+  cancel-in-progress: ${{ github.event_name == 'pull_request' }}
+
+jobs:
+  build:
+    runs-on: self-hosted
+    strategy:
+      fail-fast: true
+    steps:
+      - uses: actions/checkout@v3
+      - name: Clear Docker cache
+        run: |
+          docker system prune -af
+      - name: CI Variables
+        id: vars
+        run: echo "DOCKER_TAG=$(echo ${{ github.ref }} | cut -d'/' -f3- | sed 's/[^a-z0-9_-]/__/gi')" >> $GITHUB_ENV
+      - name: Set up Docker Buildx
+        id: buildx
+        uses: docker/setup-buildx-action@v2
+      - name: Inspect Builder
+        run: |
+          echo "Name:      ${{ steps.buildx.outputs.name }}"
+          echo "Endpoint:  ${{ steps.buildx.outputs.endpoint }}"
+          echo "Status:    ${{ steps.buildx.outputs.status }}"
+          echo "Flags:     ${{ steps.buildx.outputs.flags }}"
+          echo "Platforms: ${{ steps.buildx.outputs.platforms }}"
+          echo "DOCKER_TAG: ${{ env.DOCKER_TAG }}"
+          echo "SCOPE_NAME  ${{ env.SCOPE_NAME }}"
+      - name: Build and Run Docker Image
+        run: |
+          docker build -t ${{ env.DOCKER_TAG }} -f ./nga-ci/yamlcpp-off.dockerfile .
+          docker run -v /tmp/artifacts:/tmp/artifacts ${{ env.DOCKER_TAG }} /opt/src/Trilinos/nga-ci/test-basic-yaml.sh
+      - name: Upload artifacts
+        uses: actions/upload-artifact@v3
+        if: success() || failure()
+        with:
+          name: LastTestLog
+          path: /tmp/artifacts/LastTest.log
+          if-no-files-found: ignore
+      - name: Report Test results
+        uses: phoenix-actions/test-reporting@v12
+        if: success() || failure()
+        with:
+          name: Tests report (yamlcpp-off)
+          path: /tmp/artifacts/junit-tests-report.xml
+          reporter: java-junit
+          output-to: step-summary
+          fail-on-error: 'true'
+          list-tests: 'failed'
+          only-summary: 'true'

.github/workflows/test-yamlcpp-on.yml

@@ -0,0 +1,62 @@
+name: Build/test Mini-EM (yaml-cpp on)
+
+# Trigger the workflow on push or pull request
+on:
+  pull_request:
+    branches:
+      - develop
+      - NGA-FY23-develop
+  workflow_dispatch:
+
+# Cancel any existing jobs
+concurrency:
+  group: ${{ github.event.repository.name }}-${{ github.ref }}-${{ github.workflow }}
+  cancel-in-progress: ${{ github.event_name == 'pull_request' }}
+
+jobs:
+  build:
+    runs-on: self-hosted
+    strategy:
+      fail-fast: true
+    steps:
+      - uses: actions/checkout@v3
+      - name: Clear Docker cache
+        run: |
+          docker system prune -af
+      - name: CI Variables
+        id: vars
+        run: echo "DOCKER_TAG=$(echo ${{ github.ref }} | cut -d'/' -f3- | sed 's/[^a-z0-9_-]/__/gi')" >> $GITHUB_ENV
+      - name: Set up Docker Buildx
+        id: buildx
+        uses: docker/setup-buildx-action@v2
+      - name: Inspect Builder
+        run: |
+          echo "Name:      ${{ steps.buildx.outputs.name }}"
+          echo "Endpoint:  ${{ steps.buildx.outputs.endpoint }}"
+          echo "Status:    ${{ steps.buildx.outputs.status }}"
+          echo "Flags:     ${{ steps.buildx.outputs.flags }}"
+          echo "Platforms: ${{ steps.buildx.outputs.platforms }}"
+          echo "DOCKER_TAG: ${{ env.DOCKER_TAG }}"
+          echo "SCOPE_NAME  ${{ env.SCOPE_NAME }}"
+      - name: Build and Run Docker Image
+        run: |
+          docker build -t ${{ env.DOCKER_TAG }} -f ./nga-ci/yamlcpp-on.dockerfile .
+          docker run -v /tmp/artifacts:/tmp/artifacts ${{ env.DOCKER_TAG }} /opt/src/Trilinos/nga-ci/test-basic-yaml.sh
+      - name: Upload artifacts
+        uses: actions/upload-artifact@v3
+        if: success() || failure()
+        with:
+          name: LastTestLog
+          path: /tmp/artifacts/LastTest.log
+          if-no-files-found: ignore
+      - name: Report Test results
+        uses: phoenix-actions/test-reporting@v12
+        if: success() || failure()
+        with:
+          name: Tests report (yamlcpp-on)
+          path: /tmp/artifacts/junit-tests-report.xml
+          reporter: java-junit
+          output-to: step-summary
+          fail-on-error: 'true'
+          list-tests: 'failed'
+          only-summary: 'true'

nga-ci/build-yamlcpp-off.sh

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+#!/usr/bin/env bash
+
+set -e
+set -x
+
+. /opt/spack/share/spack/setup-env.sh
+spack env activate trilinos
+
+cd /opt/build/Trilinos
+
+export MPI_ROOT="$(dirname $(which mpicc))"
+export MPICC="${MPI_ROOT}/mpicc"
+export MPICXX="${MPI_ROOT}/mpicxx"
+export MPIF90="${MPI_ROOT}/mpif90"
+export MPIRUN="${MPI_ROOT}/mpirun"
+
+export BLAS_ROOT="$(spack location -i openblas)"
+export LAPACK_ROOT="${BLAS_ROOT}"
+
+export NETCDF_ROOT="$(spack location -i netcdf-c)"
+export MATIO_ROOT="$(spack location -i matio)"
+export HDF5_ROOT="$(spack location -i hdf5)"
+export BOOST_ROOT="$(spack location -i boost)"
+
+cmake -G "${CMAKE_GENERATOR:-Ninja}" \
+    -D CMAKE_BUILD_TYPE=DEBUG \
+    -D Trilinos_ENABLE_DEBUG=ON \
+    -D Trilinos_PARALLEL_LINK_JOBS_LIMIT=3 \
+    -D Trilinos_ENABLE_ALL_PACKAGES=OFF \
+    -D Trilinos_ENABLE_ALL_OPTIONAL_PACKAGES=ON \
+    -D Trilinos_ALLOW_NO_PACKAGES=ON \
+    -D Trilinos_DISABLE_ENABLED_FORWARD_DEP_PACKAGES=ON \
+    -D Trilinos_IGNORE_MISSING_EXTRA_REPOSITORIES=ON \
+    -D Trilinos_ENABLE_TESTS=ON \
+    -D Trilinos_TEST_CATEGORIES=BASIC \
+    -D Trilinos_ENABLE_ALL_FORWARD_DEP_PACKAGES=ON \
+    -D Trilinos_VERBOSE_CONFIGURE=OFF \
+    -D BUILD_SHARED_LIBS:BOOL=ON \
+    -D Tpetra_ENABLE_DEPRECATED_CODE=ON \
+    \
+    -D Trilinos_ENABLE_Panzer=ON \
+    -D Trilinos_ENABLE_PanzerMiniEM=ON \
+    \
+    \
+    -D TPL_ENABLE_BLAS=ON \
+    -D TPL_BLAS_LIBRARIES="${BLAS_ROOT}/lib/libopenblas.so" \
+    -D TPL_ENABLE_LAPACK=ON \
+    -D TPL_LAPACK_LIBRARIES="${LAPACK_ROOT}/lib/libopenblas.so" \
+    \
+    \
+    -D TPL_ENABLE_Boost=ON \
+    -D Boost_LIBRARY_DIRS="${BOOST_ROOT}/lib" \
+    -D Boost_INCLUDE_DIRS="${BOOST_ROOT}/include" \
+    \
+    -D TPL_ENABLE_Matio=ON \
+    -D Matio_LIBRARY_DIRS="${MATIO_ROOT}/lib" \
+    -D Matio_INCLUDE_DIRS="${MATIO_ROOT}/include" \
+    \
+    -D TPL_ENABLE_Netcdf=ON \
+    -D Netcdf_LIBRARY_NAMES=netcdf \
+    -D Netcdf_LIBRARY_DIRS="${NETCDF_ROOT}/lib" \
+    -D TPL_Netcdf_INCLUDE_DIRS="${NETCDF_ROOT}/include" \
+    \
+    -D TPL_Netcdf_PARALLEL=OFF \
+    \
+    -D TPL_ENABLE_HDF5=ON \
+    -D HDF5_LIBRARY_DIRS="${HDF5_ROOT}/lib" \
+    -D HDF5_INCLUDE_DIRS="${HDF5_ROOT}/include" \
+    -D TPL_ENABLE_Matio=OFF \
+    \
+    -D TPL_ENABLE_CUDA=OFF \
+    \
+    -D Trilinos_MUST_FIND_ALL_TPL_LIBS=OFF \
+    -D TPL_ENABLE_yaml-cpp=OFF \
+    -D TPL_ENABLE_X11=OFF \
+    -D TPL_ENABLE_Pthread=OFF \
+    -D TPL_ENABLE_BoostLib=OFF \
+    -D TPL_ENABLE_ParMETIS=OFF \
+    -D TPL_ENABLE_Zlib=OFF \
+    -D TPL_ENABLE_SuperLU=OFF \
+    -D TPL_ENABLE_Scotch=OFF \
+    \
+    \
+    -D CMAKE_C_COMPILER=${MPICC} \
+    -D CMAKE_CXX_COMPILER=${MPICXX} \
+    -D CMAKE_Fortran_COMPILER=${MPIF90} \
+    -D TPL_ENABLE_MPI=ON \
+    -D MPI_EXEC=${MPIRUN} \
+    -D MPI_EXEC_MAX_NUMPROCS=4 \
+    \
+    \
+    -S /opt/src/Trilinos -B /opt/build/Trilinos
+ninja -j 12

nga-ci/build-yamlcpp-on.sh

@@ -0,0 +1,94 @@
+#!/usr/bin/env bash
+
+set -e
+set -x
+
+. /opt/spack/share/spack/setup-env.sh
+spack env activate trilinos
+
+cd /opt/build/Trilinos
+
+export MPI_ROOT="$(dirname $(which mpicc))"
+export MPICC="${MPI_ROOT}/mpicc"
+export MPICXX="${MPI_ROOT}/mpicxx"
+export MPIF90="${MPI_ROOT}/mpif90"
+export MPIRUN="${MPI_ROOT}/mpirun"
+
+export BLAS_ROOT="$(spack location -i openblas)"
+export LAPACK_ROOT="${BLAS_ROOT}"
+
+export NETCDF_ROOT="$(spack location -i netcdf-c)"
+export MATIO_ROOT="$(spack location -i matio)"
+export HDF5_ROOT="$(spack location -i hdf5)"
+export BOOST_ROOT="$(spack location -i boost)"
+
+cmake -G "${CMAKE_GENERATOR:-Ninja}" \
+    -D CMAKE_BUILD_TYPE=DEBUG \
+    -D Trilinos_ENABLE_DEBUG=ON \
+    -D Trilinos_PARALLEL_LINK_JOBS_LIMIT=3 \
+    -D Trilinos_ENABLE_ALL_PACKAGES=OFF \
+    -D Trilinos_ENABLE_ALL_OPTIONAL_PACKAGES=ON \
+    -D Trilinos_ALLOW_NO_PACKAGES=ON \
+    -D Trilinos_DISABLE_ENABLED_FORWARD_DEP_PACKAGES=ON \
+    -D Trilinos_IGNORE_MISSING_EXTRA_REPOSITORIES=ON \
+    -D Trilinos_ENABLE_TESTS=ON \
+    -D Trilinos_TEST_CATEGORIES=BASIC \
+    -D Trilinos_ENABLE_ALL_FORWARD_DEP_PACKAGES=ON \
+    -D Trilinos_VERBOSE_CONFIGURE=OFF \
+    -D BUILD_SHARED_LIBS:BOOL=ON \
+    -D Tpetra_ENABLE_DEPRECATED_CODE=ON \
+    \
+    -D Trilinos_ENABLE_Panzer=ON \
+    -D Trilinos_ENABLE_PanzerMiniEM=ON \
+    \
+    \
+    -D TPL_ENABLE_BLAS=ON \
+    -D TPL_BLAS_LIBRARIES="${BLAS_ROOT}/lib/libopenblas.so" \
+    -D TPL_ENABLE_LAPACK=ON \
+    -D TPL_LAPACK_LIBRARIES="${LAPACK_ROOT}/lib/libopenblas.so" \
+    \
+    -D TPL_ENABLE_Boost=ON \
+    -D Boost_LIBRARY_DIRS="${BOOST_ROOT}/lib" \
+    -D Boost_INCLUDE_DIRS="${BOOST_ROOT}/include" \
+    \
+    -D TPL_ENABLE_Matio=ON \
+    -D Matio_LIBRARY_DIRS="${MATIO_ROOT}/lib" \
+    -D Matio_INCLUDE_DIRS="${MATIO_ROOT}/include" \
+    \
+    -D TPL_ENABLE_Netcdf=ON \
+    -D Netcdf_LIBRARY_NAMES=netcdf \
+    -D Netcdf_LIBRARY_DIRS="${NETCDF_ROOT}/lib" \
+    -D TPL_Netcdf_INCLUDE_DIRS="${NETCDF_ROOT}/include" \
+    \
+    -D TPL_Netcdf_PARALLEL=OFF \
+    \
+    -D TPL_ENABLE_HDF5=ON \
+    -D HDF5_LIBRARY_DIRS="${HDF5_ROOT}/lib" \
+    -D HDF5_INCLUDE_DIRS="${HDF5_ROOT}/include" \
+    \
+    -D TPL_ENABLE_CUDA=OFF \
+    \
+    -D TPL_ENABLE_yaml-cpp=ON \
+    -D yaml-cpp_LIBRARY_DIRS="${YAMLCPP_ROOT}/lib" \
+    -D yaml-cpp_INCLUDE_DIRS="${YAMLCPP_ROOT}/include" \
+    \
+    -D Trilinos_MUST_FIND_ALL_TPL_LIBS=OFF \
+    -D TPL_ENABLE_X11=OFF \
+    -D TPL_ENABLE_Pthread=OFF \
+    -D TPL_ENABLE_BoostLib=OFF \
+    -D TPL_ENABLE_ParMETIS=OFF \
+    -D TPL_ENABLE_Zlib=OFF \
+    -D TPL_ENABLE_SuperLU=OFF \
+    -D TPL_ENABLE_Scotch=OFF \
+    \
+    \
+    -D CMAKE_C_COMPILER=${MPICC} \
+    -D CMAKE_CXX_COMPILER=${MPICXX} \
+    -D CMAKE_Fortran_COMPILER=${MPIF90} \
+    -D TPL_ENABLE_MPI=ON \
+    -D MPI_EXEC=${MPIRUN} \
+    -D MPI_EXEC_MAX_NUMPROCS=4 \
+    \
+    \
+    -S /opt/src/Trilinos -B /opt/build/Trilinos
+ninja -j 12