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Add the Koina tutorial link to the README
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fcyu authored Aug 5, 2024
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Expand Up @@ -22,7 +22,6 @@ FragPipe is a comprehensive computational platform for analyzing mass spectromet
* [Custom mass offset workflow (RNA crosslinking example)](https://fragpipe.nesvilab.org/docs/tutorial_custom_mass_offset.html)
* [Diagnostic ion mining](https://fragpipe.nesvilab.org/docs/tutorial_diagnostic_mining.html)
* [FPOP](https://fragpipe.nesvilab.org/docs/tutorial_fpop.html)

* TMT/iTRAQ quantification
* [Single plex](https://fragpipe.nesvilab.org/docs/tutorial_tmt.html)
* [Multiple plexes with a pooled reference sample](https://fragpipe.nesvilab.org/docs/tutorial_tmt-2plexes.html)
Expand All @@ -32,6 +31,7 @@ FragPipe is a comprehensive computational platform for analyzing mass spectromet
* [DIA analysis](https://fragpipe.nesvilab.org/docs/tutorial_DIA.html)
* [Novel/variant peptide detection using two-pass search](https://fragpipe.nesvilab.org/docs/tutorial_two_pass_search.html)
* [Group FDR estimation for novel/variant peptide analysis](https://fragpipe.nesvilab.org/docs/tutorial_group_fdr.html)
* [Use peptide prediction models from Koina for MSBooster feature generation](https://fragpipe.nesvilab.org/docs/tutorial_koina.html)

#### Resources
* [Interpreting output files](https://fragpipe.nesvilab.org/docs/tutorial_fragpipe_outputs.html)
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