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Reference issue #275
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jstjohn committed Oct 8, 2024
1 parent 935c2be commit f5a9f25
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Expand Up @@ -78,9 +78,12 @@
logger = logging.getLogger(__file__)

# Add some fields specific to the BIOBERT config that we want to override by default
# TODO automatically determine which fields a user is trying to override in the future.
_OVERRIDE_BIOBERT_CONFIG_DEFAULTS: List[str] = OVERRIDE_BIONEMO_CONFIG_DEFAULTS + [
"return_only_hidden_states",
"include_hiddens",
# Model parallelism settings! Important to override these if the user requests different settings from how
# a model was trained (common). See https://github.com/NVIDIA/bionemo-fw-ea/issues/275
"tensor_model_parallel_size",
"pipeline_model_parallel_size",
"virtual_pipeline_model_parallel_size",
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