Mongo indexes

server/app/models/analysis.rb

@@ -71,7 +71,7 @@ class Analysis
 
   # Indexes
   index({ uuid: 1 }, unique: true)
-  index(id: 1)
+  #index(id: 1)
   index(name: 1)
   index(created_at: 1)
   index(updated_at: -1)
@@ -82,6 +82,7 @@ class Analysis
   validates_attachment_content_type :seed_zip, content_type: ['application/zip']
 
   # Callbacks
+  before_create :set_uuid_from_id
   after_create :verify_uuid
   before_destroy :queue_delete_files
 
@@ -510,6 +511,10 @@ def queue_delete_files
     end
   end
 
+  def set_uuid_from_id
+    self.uuid = id
+  end
+
   def verify_uuid
     self.uuid = id if uuid.nil?
     save!

server/app/models/data_point.rb

@@ -37,7 +37,7 @@ class DataPoint
 
   # Indexes
   index({ uuid: 1 }, unique: true)
-  index(id: 1)
+  #index(id: 1)
   index(name: 1)
   index(status: 1)
   index(analysis_id: 1, created_at: 1)
@@ -50,6 +50,7 @@ class DataPoint
   index(analysis_id: 1, status: 1, status_message: 1, created_at: 1)
 
   # Callbacks
+  before_create :set_uuid_from_id
   after_create :verify_uuid
   before_destroy :destroy_background_job
 
@@ -125,6 +126,10 @@ def set_queued_state
 
   protected
 
+  def set_uuid_from_id
+    self.uuid = id
+  end
+
   def verify_uuid
     self.uuid = id if uuid.nil?
     save!

server/app/models/job.rb

@@ -22,7 +22,7 @@ class Job
 
   belongs_to :analysis
 
-  index(id: 1)
+  #index(id: 1)
   index(created_at: 1)
   index(analysis_id: 1)
   index(analysis_id: 1, index: 1, analysis_type: 1)

server/app/models/measure.rb

@@ -24,13 +24,14 @@ class Measure
 
   # Indexes
   index({ uuid: 1 }, unique: true)
-  index(id: 1)
+  #index(id: 1)
   index(name: 1)
   index(analysis_id: 1)
   index(analysis_id: 1, uuid: 1)
   index({ analysis_id: 1, name: 1 }, unique: true)
 
   # Callbacks
+  before_create :set_uuid_from_id
   after_create :verify_uuid
 
   # Parse Analysis JSON to pull out the measures and variables
@@ -145,6 +146,10 @@ def self.create_from_os_json(analysis_id, os_json, pat_json)
 
   protected
 
+  def set_uuid_from_id
+    self.uuid = id
+  end
+
   def verify_uuid
     self.uuid = id if uuid.nil?
     save!

server/app/models/pareto.rb

@@ -20,7 +20,7 @@ class Pareto
 
   # Indexes
   index({ uuid: 1 }, unique: true)
-  index(id: 1)
+  #index(id: 1)
   index(analysis_id: 1)
 
   # Validation

server/app/models/project.rb

@@ -17,10 +17,11 @@ class Project
 
   # Indexes
   index({ uuid: 1 }, unique: true)
-  index(id: 1)
+  #index(id: 1)
   index(name: 1)
 
   # Callbacks
+  before_create :set_uuid_from_id
   after_create :verify_uuid
 
   def create_single_analysis(analysis_uuid, analysis_name, problem_uuid, problem_name)
@@ -36,6 +37,10 @@ def create_single_analysis(analysis_uuid, analysis_name, problem_uuid, problem_n
 
   protected
 
+  def set_uuid_from_id
+    self.uuid = id
+  end
+
   def verify_uuid
     self.uuid = id if uuid.nil?
     save!

server/app/models/variable.rb

@@ -63,7 +63,7 @@ class Variable
 
   # Indexes
   index({ uuid: 1 }, unique: true)
-  index(id: 1)
+  #index(id: 1)
   index(name: 1)
   index(r_index: 1)
   index(analysis_id: 1)
@@ -76,6 +76,7 @@ class Variable
   # validates_attachment :seed_zip, content_type: { content_type: "application/zip" }
 
   # Callbacks
+  before_create :set_uuid_from_id
   after_create :verify_uuid
   before_destroy :destroy_preflight_images
 
@@ -382,6 +383,10 @@ def map_discrete_hash_to_array
 
   protected
 
+  def set_uuid_from_id
+    self.uuid = id
+  end
+
   def verify_uuid
     self.uuid = id if uuid.nil?
     save!

server/spec/features/docker_stack_algo_spec.rb

@@ -7,10 +7,10 @@
 # To Run this test manually:
 #
 #   start a server stack with /spec added and ssh into the Web container
+#   you may need to ADD the spec folder in the Dockerfile
 #   >ruby /opt/openstudio/bin/openstudio_meta install_gems
-#   >cd /opt/openstudio/spec/
-#   >gem install rspec
-#   >rspec openstudio_algo_spec.rb
+#   >bundle install --with development test
+#   >rspec spec/features/docker_stack_algo_spec.rb
 #
 #################################################################################
 
@@ -213,6 +213,14 @@
       sleep Random.new.rand(1.0..10.0)
       retry if get_count <= get_count_max
     end
+
+    puts 'check logs for mongo index errors'
+    a = RestClient.get "http://#{@host}/analyses/#{analysis_id}/debug_log"
+    expect(a.headers[:status]).to eq("200 OK")
+    expect(a.body).not_to include "OperationFailure"
+    expect(a.body).not_to include "FATAL"
+    expect(a.body).to include "Created indexes"
+
   end # cli_test
 
   it 'run spea_nrel analysis', :spea_nrel, js: true do
@@ -346,6 +354,14 @@
       sleep Random.new.rand(1.0..10.0)
       retry if get_count <= get_count_max
     end
+
+    puts 'check logs for mongo index errors'
+    a = RestClient.get "http://#{@host}/analyses/#{analysis_id}/debug_log"
+    expect(a.headers[:status]).to eq("200 OK")
+    expect(a.body).not_to include "OperationFailure"
+    expect(a.body).not_to include "FATAL"
+    expect(a.body).to include "Created indexes"
+
   end # spea_nrel
 
   it 'run pso analysis', :pso, js: true do
@@ -479,6 +495,14 @@
       sleep Random.new.rand(1.0..10.0)
       retry if get_count <= get_count_max
     end
+
+    puts 'check logs for mongo index errors'
+    a = RestClient.get "http://#{@host}/analyses/#{analysis_id}/debug_log"
+    expect(a.headers[:status]).to eq("200 OK")
+    expect(a.body).not_to include "OperationFailure"
+    expect(a.body).not_to include "FATAL"
+    expect(a.body).to include "Created indexes"
+
   end # pso
 
   it 'run rgenoud analysis', :rgenoud, js: true do
@@ -613,6 +637,14 @@
       sleep Random.new.rand(1.0..10.0)
       retry if get_count <= get_count_max
     end
+
+    puts 'check logs for mongo index errors'
+    a = RestClient.get "http://#{@host}/analyses/#{analysis_id}/debug_log"
+    expect(a.headers[:status]).to eq("200 OK")
+    expect(a.body).not_to include "OperationFailure"
+    expect(a.body).not_to include "FATAL"
+    expect(a.body).to include "Created indexes"
+
   end # rgenoud
 
   it 'run sobol analysis', :sobol, js: true do
@@ -770,6 +802,14 @@
     expect(a.headers[:content_type]).to eq("application/zip")
     expect(a.size).to be >(30000)
     expect(a.size).to be <(40000)
+
+    puts 'check logs for mongo index errors'
+    a = RestClient.get "http://#{@host}/analyses/#{analysis_id}/debug_log"
+    expect(a.headers[:status]).to eq("200 OK")
+    expect(a.body).not_to include "OperationFailure"
+    expect(a.body).not_to include "FATAL"
+    expect(a.body).to include "Created indexes"
+
   end # sobol
 
   it 'run lhs analysis', :lhs, js: true do
@@ -908,6 +948,14 @@
       sleep Random.new.rand(1.0..10.0)
       retry if get_count <= get_count_max
     end
+
+    puts 'check logs for mongo index errors'
+    a = RestClient.get "http://#{@host}/analyses/#{analysis_id}/debug_log"
+    expect(a.headers[:status]).to eq("200 OK")
+    expect(a.body).not_to include "OperationFailure"
+    expect(a.body).not_to include "FATAL"
+    expect(a.body).to include "Created indexes"
+
   end # lhs
 
   it 'run lhs_discrete analysis', :lhs_discrete, js: true do
@@ -1051,6 +1099,14 @@
       sleep Random.new.rand(1.0..10.0)
       retry if get_count <= get_count_max
     end
+
+    puts 'check logs for mongo index errors'
+    a = RestClient.get "http://#{@host}/analyses/#{analysis_id}/debug_log"
+    expect(a.headers[:status]).to eq("200 OK")
+    expect(a.body).not_to include "OperationFailure"
+    expect(a.body).not_to include "FATAL"
+    expect(a.body).to include "Created indexes"
+
   end # lhs_discrete
 
   it 'run morris analysis', :morris, js: true do
@@ -1196,6 +1252,14 @@
     expect(a.headers[:content_type]).to eq("application/zip")
     expect(a.size).to be >(170000)
     expect(a.size).to be <(200000)
+
+    puts 'check logs for mongo index errors'
+    a = RestClient.get "http://#{@host}/analyses/#{analysis_id}/debug_log"
+    expect(a.headers[:status]).to eq("200 OK")
+    expect(a.body).not_to include "OperationFailure"
+    expect(a.body).not_to include "FATAL"
+    expect(a.body).to include "Created indexes"
+
   end # morris
 
   it 'run single_run analysis', :single_run, js: true do
@@ -1325,5 +1389,13 @@
       sleep Random.new.rand(1.0..10.0)
       retry if get_count <= get_count_max
     end
+
+    puts 'check logs for mongo index errors'
+    a = RestClient.get "http://#{@host}/analyses/#{analysis_id}/debug_log"
+    expect(a.headers[:status]).to eq("200 OK")
+    expect(a.body).not_to include "OperationFailure"
+    expect(a.body).not_to include "FATAL"
+    expect(a.body).to include "Created indexes"
+
   end # single_run
 end

server/spec/features/docker_stack_test_apis_spec.rb

@@ -7,10 +7,10 @@
 # To Run this test manually:
 #
 #   start a server stack with /spec added and ssh into the Web container
+#   you may need to ADD the spec folder in the Dockerfile
 #   >ruby /opt/openstudio/bin/openstudio_meta install_gems
-#   >cd /opt/openstudio/spec/
-#   >gem install rspec
-#   >rspec openstudio_algo_spec.rb
+#   >bundle install --with development test
+#   >rspec spec/features/docker_stack_test_apis_spec.rb
 #
 #################################################################################
 

server/spec/features/docker_stack_urbanopt_algo_spec.rb

@@ -7,9 +7,10 @@
 # To Run this test manually:
 #
 #   start a server stack with /spec added and ssh into the Web container
-#   >cd /opt/openstudio/server/spec/
-#   >gem install rest-client rails_helper json rspec rspec-retry
-#   >rspec openstudio_algo_spec.rb
+#   you may need to ADD the spec folder in the Dockerfile
+#   >ruby /opt/openstudio/bin/openstudio_meta install_gems
+#   >bundle install --with development test
+#   >rspec spec/features/docker_stack_urbanopt_algo_spec.rb
 #
 #################################################################################
 
@@ -267,5 +268,13 @@
       sleep Random.new.rand(1.0..10.0)
       retry if get_count <= get_count_max
     end
+
+    puts 'check logs for mongo index errors'
+    a = RestClient.get "http://#{@host}/analyses/#{analysis_id}/debug_log"
+    expect(a.headers[:status]).to eq("200 OK")
+    expect(a.body).not_to include "OperationFailure"
+    expect(a.body).not_to include "FATAL"
+    expect(a.body).to include "Created indexes"
+
   end # urbanopt_single_run
 end