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Feature/36558/st george old import mising records #123

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@NImeson NImeson commented Oct 31, 2024

What?
Adding in functionality to use the test status 10 value when recording the status of variant results.

Why?
There are 64 records that are not currently being imported from the raw files into MBIS / CASREF. These records are large;ly abnormal results that which we really do want to capture.

Need to broaden the regex that assigns a teststatus as 2. To include fields that contain strings such as 'IVS' or 'Del X 5-7'.

How?
Added in method to ctreate BRCA1/2 records as standard when we don't know what the FS gene in question is .
Added in method to handle a variant when we don't know the gene it belongs to
Expanded to exon regex to account for additional variant nomenclatures eg. IVS, DEL X 5-7

Testing?

@NImeson NImeson marked this pull request as draft October 31, 2024 10:50
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