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NeuroDataPub v0.4

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@sebastientourbier sebastientourbier released this 19 Jan 14:02
v0.4
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NeuroDataPub is an open-source neuroimaging dataset publication tool, built on top of Datalad , designed to helpsNCCR-Synapsy members in the task of managing their dataset with Datalad, and referencing them to the NCCR-SYNAPSY GitHub organization.

This corresponds to the fourth beta release of NeuroDataPub.

What's changed?

New Features

  • Create a bash script that records all commands generated by NeuroDataPub for later execution.

  • Give the option to handle datasets that do not follow BIDS standard. This can be configured either via the new is_not_bids option flag of the commandline interface, or by disabling the "Dataset is bids" option in the "Configuration of Directories" tab.

  • Ignore existing files during the copy of dataset files with rsync.

Minor changes

  • Copyright year has been updated in all files.

  • --bids_dir argument of the commandline interface has been changed to --dataset_dir.

  • The attribute input_bids_dir of NeuroDataPubProject has been changed to input_dataset_dir.

  • Suppress QXcbConnection: XCB error message during execution of NeuroDataPub.

Bug Fixes

  • Correct the pattern employed during the check of the schema of the JSON configurations for the "github_login" and "github_token" fields.

  • Do not reload datalap.api and do not reset osf credentials in authenticate_osf().

Documentation

  • Update documentation for the creation of the bash script using NeuroDataPub Assistant.

  • Add details about the new option to handle non BIDS datasets.

More...

Please check the main release pull request PR #38.

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