Help pinpoint a installation failure cause?

[muratetm]

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Can you suggest a way to determine what it is unhappy about?

Thanks

Mike

[jmccreight]

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm [email protected] wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Can you suggest a way to determine what it is unhappy about?

Thanks

Mike

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#46

[muratetm]

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from github with the ‘download zip’ button, but I can’t get the devtools install to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight [email protected] wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm [email protected] wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Can you suggest a way to determine what it is unhappy about?

Thanks

Mike

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#46

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[jmccreight]

are you in the lab downstairs? which computer specifically. I can log in to
it

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:44 PM, muratetm [email protected] wrote:

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from github with the
‘download zip’ button, but I can’t get the devtools install to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight [email protected]
wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm [email protected]
wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Can you suggest a way to determine what it is unhappy about?

Thanks

Mike

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#46

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#46 (comment)

[jmccreight]

But maybe you're not down there becase rwrfhydro should already be
installed.
if so just
library(rwrfhydro)

regardless, I'd ask you to
devtools::install_github("mccreigh/rwrfhydro", ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:46 PM, James McCreight [email protected] wrote:

are you in the lab downstairs? which computer specifically. I can log in
to it

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:44 PM, muratetm [email protected] wrote:

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from github with the
‘download zip’ button, but I can’t get the devtools install to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight [email protected]
wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm [email protected]
wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Can you suggest a way to determine what it is unhappy about?

Thanks

Mike

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You are receiving this because you are subscribed to this thread.
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#46

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#46 (comment)

[muratetm]

I’m in Huntsville, AL. Have I inadvertently reached some forbidden place?

On May 3, 2016, at 3:46 PM, James McCreight [email protected] wrote:

are you in the lab downstairs? which computer specifically. I can log in to
it

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:44 PM, muratetm [email protected] wrote:

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from github with the
‘download zip’ button, but I can’t get the devtools install to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight [email protected]
wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm [email protected]
wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Can you suggest a way to determine what it is unhappy about?

Thanks

Mike

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#46

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#46 (comment)

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[muratetm]

I’ve been trying to run the scripts in the R folder and I’m getting complaints about no curl. It is installed, but that might be why the rwrfhydro won’t install

On May 3, 2016, at 3:46 PM, James McCreight [email protected] wrote:

are you in the lab downstairs? which computer specifically. I can log in to
it

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:44 PM, muratetm [email protected] wrote:

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from github with the
‘download zip’ button, but I can’t get the devtools install to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight [email protected]
wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm [email protected]
wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Can you suggest a way to determine what it is unhappy about?

Thanks

Mike

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#46

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#46 (comment)

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[jmccreight]

Sorry. We have a class going on right now, I assumed you were in there.

send me the output of
sessionInfo()

Try this and see if the failure is more informative/different
devtools::install_github("mccreigh/rwrfhydro", ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:50 PM, muratetm [email protected] wrote:

I’m in Huntsville, AL. Have I inadvertently reached some forbidden place?

On May 3, 2016, at 3:46 PM, James McCreight [email protected]
wrote:

are you in the lab downstairs? which computer specifically. I can log in
to
it

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:44 PM, muratetm [email protected]
wrote:

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from github with
the
‘download zip’ button, but I can’t get the devtools install to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight <
[email protected]>
wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm [email protected]
wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Can you suggest a way to determine what it is unhappy about?

Thanks

Mike

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You are receiving this because you are subscribed to this thread.
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#46

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Reply to this email directly or view it on GitHub

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<
https://github.com/mccreigh/rwrfhydro/issues/46#issuecomment-216658728>

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#46 (comment)

[muratetm]

sessionInfo()
R version 3.1.3 (2015-03-09)
Platform: x86_64-unknown-linux-gnu (64-bit)
Running under: Ubuntu 14.04.4 LTS

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] curl_0.5

loaded via a namespace (and not attached):
[1] codetools_0.2-10 foreach_1.4.2 iterators_1.0.7 plyr_1.8.1
[5] Rcpp_0.11.5 tools_3.1.3

I did get curl to install.

devtools::install_github("mccreigh/rwrfhydro",ref='devBranch')
Downloading github repo mccreigh/rwrfhydro@devBranch
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Thanks

Mike

On 05/03/2016 03:53 PM, James McCreight wrote:

Sorry. We have a class going on right now, I assumed you were in there.

send me the output of
sessionInfo()

Try this and see if the failure is more informative/different
devtools::install_github("mccreigh/rwrfhydro", ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:50 PM, muratetm [email protected] wrote:

I’m in Huntsville, AL. Have I inadvertently reached some forbidden
place?

On May 3, 2016, at 3:46 PM, James McCreight [email protected]
wrote:

are you in the lab downstairs? which computer specifically. I can
log in
to
it

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:44 PM, muratetm [email protected]
wrote:

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from github
with
the
‘download zip’ button, but I can’t get the devtools install to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight <
[email protected]>
wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm
[email protected]
wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet,
...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet,
...) :
error in running command

Can you suggest a way to determine what it is unhappy about?

Thanks

Mike

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thread.
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#46

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#46 (comment)

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#46 (comment)

[jmccreight]

this is not like I've ever seen...

try this
library(devtools)
sessionInfo()
install_github("mccreigh/rwrfhydro",ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 3:02 PM, muratetm [email protected] wrote:

sessionInfo()
R version 3.1.3 (2015-03-09)
Platform: x86_64-unknown-linux-gnu (64-bit)
Running under: Ubuntu 14.04.4 LTS

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] curl_0.5

loaded via a namespace (and not attached):
[1] codetools_0.2-10 foreach_1.4.2 iterators_1.0.7 plyr_1.8.1
[5] Rcpp_0.11.5 tools_3.1.3

I did get curl to install.

devtools::install_github("mccreigh/rwrfhydro",ref='devBranch')
Downloading github repo mccreigh/rwrfhydro@devBranch
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Thanks

Mike

On 05/03/2016 03:53 PM, James McCreight wrote:

Sorry. We have a class going on right now, I assumed you were in there.

send me the output of
sessionInfo()

Try this and see if the failure is more informative/different
devtools::install_github("mccreigh/rwrfhydro", ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:50 PM, muratetm [email protected]
wrote:

I’m in Huntsville, AL. Have I inadvertently reached some forbidden
place?

On May 3, 2016, at 3:46 PM, James McCreight <
[email protected]>
wrote:

are you in the lab downstairs? which computer specifically. I can
log in
to
it

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:44 PM, muratetm [email protected]
wrote:

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from github
with
the
‘download zip’ button, but I can’t get the devtools install to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight <
[email protected]>
wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm
[email protected]
wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet,
...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet,
...) :
error in running command

Can you suggest a way to determine what it is unhappy about?

Thanks

Mike

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thread.
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#46

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<
#46 (comment)

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https://github.com/mccreigh/rwrfhydro/issues/46#issuecomment-216660294>

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#46 (comment)

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#46 (comment)

[muratetm]

library(devtools)
sessionInfo()
R version 3.1.3 (2015-03-09)
Platform: x86_64-unknown-linux-gnu (64-bit)
Running under: Ubuntu 14.04.4 LTS

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] devtools_1.7.0 curl_0.5

loaded via a namespace (and not attached):
[1] bitops_1.0-6 codetools_0.2-10 foreach_1.4.2 httr_0.6.1
[5] iterators_1.0.7 plyr_1.8.1 Rcpp_0.11.5 RCurl_1.95-4.5
[9] stringr_0.6.2 tools_3.1.3

install_github("mccreigh/rwrfhydro",ref='devBranch')
Downloading github repo mccreigh/rwrfhydro@devBranch
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

It is weird, but I have the scripts I need working (snodas). I thought
there might be a simple explanation that an experienced user would know,
but I don't want to take up your time.

Mike

On 05/03/2016 04:11 PM, James McCreight wrote:

this is not like I've ever seen...

try this
library(devtools)
sessionInfo()
install_github("mccreigh/rwrfhydro",ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 3:02 PM, muratetm [email protected] wrote:

sessionInfo()
R version 3.1.3 (2015-03-09)
Platform: x86_64-unknown-linux-gnu (64-bit)
Running under: Ubuntu 14.04.4 LTS

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] curl_0.5

loaded via a namespace (and not attached):
[1] codetools_0.2-10 foreach_1.4.2 iterators_1.0.7 plyr_1.8.1
[5] Rcpp_0.11.5 tools_3.1.3

I did get curl to install.

devtools::install_github("mccreigh/rwrfhydro",ref='devBranch')
Downloading github repo mccreigh/rwrfhydro@devBranch
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Thanks

Mike

On 05/03/2016 03:53 PM, James McCreight wrote:

Sorry. We have a class going on right now, I assumed you were in
there.

send me the output of
sessionInfo()

Try this and see if the failure is more informative/different
devtools::install_github("mccreigh/rwrfhydro", ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:50 PM, muratetm [email protected]
wrote:

I’m in Huntsville, AL. Have I inadvertently reached some forbidden
place?

On May 3, 2016, at 3:46 PM, James McCreight <
[email protected]>
wrote:

are you in the lab downstairs? which computer specifically. I can
log in
to
it

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:44 PM, muratetm
[email protected]
wrote:

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from github
with
the
‘download zip’ button, but I can’t get the devtools install
to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight <
[email protected]>
wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm
[email protected]
wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet,
...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr = quiet,
...) :
error in running command

Can you suggest a way to determine what it is unhappy about?

Thanks

Mike

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#46 (comment)

[jmccreight]

Perhaps

getOption("unzip")

r-lib/devtools#406

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 3:15 PM, muratetm [email protected] wrote:

library(devtools)
sessionInfo()
R version 3.1.3 (2015-03-09)
Platform: x86_64-unknown-linux-gnu (64-bit)
Running under: Ubuntu 14.04.4 LTS

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] devtools_1.7.0 curl_0.5

loaded via a namespace (and not attached):
[1] bitops_1.0-6 codetools_0.2-10 foreach_1.4.2 httr_0.6.1
[5] iterators_1.0.7 plyr_1.8.1 Rcpp_0.11.5 RCurl_1.95-4.5
[9] stringr_0.6.2 tools_3.1.3

install_github("mccreigh/rwrfhydro",ref='devBranch')
Downloading github repo mccreigh/rwrfhydro@devBranch
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

It is weird, but I have the scripts I need working (snodas). I thought
there might be a simple explanation that an experienced user would know,
but I don't want to take up your time.

Mike

On 05/03/2016 04:11 PM, James McCreight wrote:

this is not like I've ever seen...

try this
library(devtools)
sessionInfo()
install_github("mccreigh/rwrfhydro",ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 3:02 PM, muratetm [email protected]
wrote:

sessionInfo()
R version 3.1.3 (2015-03-09)
Platform: x86_64-unknown-linux-gnu (64-bit)
Running under: Ubuntu 14.04.4 LTS

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] curl_0.5

loaded via a namespace (and not attached):
[1] codetools_0.2-10 foreach_1.4.2 iterators_1.0.7 plyr_1.8.1
[5] Rcpp_0.11.5 tools_3.1.3

I did get curl to install.

devtools::install_github("mccreigh/rwrfhydro",ref='devBranch')
Downloading github repo mccreigh/rwrfhydro@devBranch
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Thanks

Mike

On 05/03/2016 03:53 PM, James McCreight wrote:

Sorry. We have a class going on right now, I assumed you were in
there.

send me the output of
sessionInfo()

Try this and see if the failure is more informative/different
devtools::install_github("mccreigh/rwrfhydro", ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:50 PM, muratetm [email protected]
wrote:

I’m in Huntsville, AL. Have I inadvertently reached some forbidden
place?

On May 3, 2016, at 3:46 PM, James McCreight <
[email protected]>
wrote:

are you in the lab downstairs? which computer specifically. I can
log in
to
it

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:44 PM, muratetm
[email protected]
wrote:

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from
github
with
the
‘download zip’ button, but I can’t get the devtools install
to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight <
[email protected]>
wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm
[email protected]
wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr =
quiet,
...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr =
quiet,
...) :
error in running command

Can you suggest a way to determine what it is unhappy
about?

Thanks

Mike

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You are receiving this because you are subscribed to this
thread.
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#46 (comment)

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#46 (comment)

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#46 (comment)

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#46 (comment)

[muratetm]

That was it.

It would have taken me a long time to find that, thanks.

I have to update my R to 3.2.0, but I know how to do that.

Cheers

Mike

On 05/03/2016 04:20 PM, James McCreight wrote:

Perhaps

getOption("unzip")

r-lib/devtools#406

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 3:15 PM, muratetm [email protected] wrote:

library(devtools)
sessionInfo()
R version 3.1.3 (2015-03-09)
Platform: x86_64-unknown-linux-gnu (64-bit)
Running under: Ubuntu 14.04.4 LTS

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] devtools_1.7.0 curl_0.5

loaded via a namespace (and not attached):
[1] bitops_1.0-6 codetools_0.2-10 foreach_1.4.2 httr_0.6.1
[5] iterators_1.0.7 plyr_1.8.1 Rcpp_0.11.5 RCurl_1.95-4.5
[9] stringr_0.6.2 tools_3.1.3

install_github("mccreigh/rwrfhydro",ref='devBranch')
Downloading github repo mccreigh/rwrfhydro@devBranch
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

It is weird, but I have the scripts I need working (snodas). I thought
there might be a simple explanation that an experienced user would know,
but I don't want to take up your time.

Mike

On 05/03/2016 04:11 PM, James McCreight wrote:

this is not like I've ever seen...

try this
library(devtools)
sessionInfo()
install_github("mccreigh/rwrfhydro",ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 3:02 PM, muratetm [email protected]
wrote:

sessionInfo()
R version 3.1.3 (2015-03-09)
Platform: x86_64-unknown-linux-gnu (64-bit)
Running under: Ubuntu 14.04.4 LTS

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] curl_0.5

loaded via a namespace (and not attached):
[1] codetools_0.2-10 foreach_1.4.2 iterators_1.0.7 plyr_1.8.1
[5] Rcpp_0.11.5 tools_3.1.3

I did get curl to install.

devtools::install_github("mccreigh/rwrfhydro",ref='devBranch')
Downloading github repo mccreigh/rwrfhydro@devBranch
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Thanks

Mike

On 05/03/2016 03:53 PM, James McCreight wrote:

Sorry. We have a class going on right now, I assumed you were in
there.

send me the output of
sessionInfo()

Try this and see if the failure is more informative/different
devtools::install_github("mccreigh/rwrfhydro", ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:50 PM, muratetm
[email protected]
wrote:

I’m in Huntsville, AL. Have I inadvertently reached some
forbidden
place?

On May 3, 2016, at 3:46 PM, James McCreight <
[email protected]>
wrote:

are you in the lab downstairs? which computer
specifically. I can
log in
to
it

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:44 PM, muratetm
[email protected]
wrote:

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from
github
with
the
‘download zip’ button, but I can’t get the devtools install
to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight <
[email protected]>
wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm
[email protected]
wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr =
quiet,
...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr =
quiet,
...) :
error in running command

Can you suggest a way to determine what it is unhappy
about?

Thanks

Mike

—
You are receiving this because you are subscribed to
this
thread.
Reply to this email directly or view it on GitHub
#46

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You are receiving this because you authored the thread.
Reply to this email directly or view it on GitHub

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#46 (comment)

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#46 (comment)

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#46 (comment)

[jmccreight]

I just googled
"devtools error in running command"

good luck out there!!
btw new release coming soon (not that it really matters if you're using
devBranch).

James

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 3:26 PM, muratetm [email protected] wrote:

That was it.

It would have taken me a long time to find that, thanks.

I have to update my R to 3.2.0, but I know how to do that.

Cheers

Mike

On 05/03/2016 04:20 PM, James McCreight wrote:

Perhaps

getOption("unzip")

r-lib/devtools#406

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 3:15 PM, muratetm [email protected]
wrote:

library(devtools)
sessionInfo()
R version 3.1.3 (2015-03-09)
Platform: x86_64-unknown-linux-gnu (64-bit)
Running under: Ubuntu 14.04.4 LTS

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] devtools_1.7.0 curl_0.5

loaded via a namespace (and not attached):
[1] bitops_1.0-6 codetools_0.2-10 foreach_1.4.2 httr_0.6.1
[5] iterators_1.0.7 plyr_1.8.1 Rcpp_0.11.5 RCurl_1.95-4.5
[9] stringr_0.6.2 tools_3.1.3

install_github("mccreigh/rwrfhydro",ref='devBranch')
Downloading github repo mccreigh/rwrfhydro@devBranch
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

It is weird, but I have the scripts I need working (snodas). I thought
there might be a simple explanation that an experienced user would
know,
but I don't want to take up your time.

Mike

On 05/03/2016 04:11 PM, James McCreight wrote:

this is not like I've ever seen...

try this
library(devtools)
sessionInfo()
install_github("mccreigh/rwrfhydro",ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 3:02 PM, muratetm [email protected]
wrote:

sessionInfo()
R version 3.1.3 (2015-03-09)
Platform: x86_64-unknown-linux-gnu (64-bit)
Running under: Ubuntu 14.04.4 LTS

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] curl_0.5

loaded via a namespace (and not attached):
[1] codetools_0.2-10 foreach_1.4.2 iterators_1.0.7 plyr_1.8.1
[5] Rcpp_0.11.5 tools_3.1.3

I did get curl to install.

devtools::install_github("mccreigh/rwrfhydro",ref='devBranch')
Downloading github repo mccreigh/rwrfhydro@devBranch
Error in system(full, intern = quiet, ignore.stderr = quiet, ...) :
error in running command

Thanks

Mike

On 05/03/2016 03:53 PM, James McCreight wrote:

Sorry. We have a class going on right now, I assumed you were in
there.

send me the output of
sessionInfo()

Try this and see if the failure is more informative/different
devtools::install_github("mccreigh/rwrfhydro", ref='devBranch')

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:50 PM, muratetm
[email protected]
wrote:

I’m in Huntsville, AL. Have I inadvertently reached some
forbidden
place?

On May 3, 2016, at 3:46 PM, James McCreight <
[email protected]>
wrote:

are you in the lab downstairs? which computer
specifically. I can
log in
to
it

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:44 PM, muratetm
[email protected]
wrote:

A Dell workstation

ubuntu 14.40 LTS
Intel Xeon(R) E5-2630v3 2.4GHz x 16
32Gb memory
Gallium 0.4 on NVD9 graphics card

I was able to download the zip of the directory tree from
github
with
the
‘download zip’ button, but I can’t get the devtools install
to work

Thanks

Mike

On May 3, 2016, at 3:36 PM, James McCreight <
[email protected]>
wrote:

what machine are you on?

---

James L. McCreight
office: (303) 497-8404
cell: (831) 261-5149

On Tue, May 3, 2016 at 2:16 PM, muratetm
[email protected]
wrote:

I tried the install via devtools and get the following:

devtools::install_github("mccreigh/rwrfhydro")
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr =
quiet,
...) :
error in running command

Here is the Sys.info

Sys.info()
sysname
"Linux"
release
"3.13.0-79-generic"
version
"#123-Ubuntu SMP Fri Feb 19 14:27:58 UTC 2016"
nodename
"fisher"
machine
"x86_64"
login
"mmuratet"
user
"mmuratet"
effective_user
"mmuratet"

I tried to increase the information, but to no avail

devtools::install_github("mccreigh/rwrfhydro",quiet=FALSE)
Downloading github repo mccreigh/rwrfhydro@master
Error in system(full, intern = quiet, ignore.stderr =
quiet,
...) :
error in running command

Can you suggest a way to determine what it is unhappy
about?

Thanks

Mike

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