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Adding new kraken2 report #187

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Feb 24, 2021
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11 changes: 11 additions & 0 deletions data/modules/kraken/v2.1.1/README.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,11 @@

## Kraken2 report files generated using `--report` and `--report-minimizer-data` parameter

```bash
kraken2 \
--db minikraken2_v2_8GB_201904_UPDATE \
--report-minimizer-data \
--report metagenome.kreport \
--paired \
metagenome.1.fastq metagenome.2.fastq
```
22 changes: 22 additions & 0 deletions data/modules/kraken/v2.1.1/metagenome.kreport
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@@ -0,0 +1,22 @@
99.98 199194 199194 0 0 U 0 unclassified
0.02 46 0 279 98 R 1 root
0.02 46 0 279 98 R1 131567 cellular organisms
0.02 46 0 279 98 D 2 Bacteria
0.02 44 0 260 83 P 1224 Proteobacteria
0.02 44 0 260 83 C 1236 Gammaproteobacteria
0.02 44 0 260 83 O 91347 Enterobacterales
0.02 44 0 260 83 F 543 Enterobacteriaceae
0.02 44 0 260 83 G 561 Escherichia
0.02 44 0 260 83 S 562 Escherichia coli
0.02 44 0 260 83 S1 83333 Escherichia coli K-12
0.02 44 44 260 83 S2 511145 Escherichia coli str. K-12 substr. MG1655
0.00 2 0 19 15 D1 1783272 Terrabacteria group
0.00 2 0 19 15 P 1239 Firmicutes
0.00 2 0 19 15 C 91061 Bacilli
0.00 2 0 19 15 O 1385 Bacillales
0.00 2 0 19 15 F 186817 Bacillaceae
0.00 2 0 19 15 G 1386 Bacillus
0.00 2 0 19 15 G1 653685 Bacillus subtilis group
0.00 2 0 40 15 S 1423 Bacillus subtilis
0.00 2 0 40 15 S1 135461 Bacillus subtilis subsp. subtilis
0.00 2 2 40 15 S2 224308 Bacillus subtilis subsp. subtilis str. 168