DEVELOP-122: Clear general statistics table

[matrulda]

This PR contains the following changes:

• The multiqc config has been divided into 3 different configs, on for each kind of report. It is ofc up for debate if this is the best way. An alternative way would be to have a base config and then specify special case config values in the multiqc commands or in a separate configs.
• Report changes:
  • The FastQC sequence counts section is removed from flowcell and projects reports.
  • Flowcell report:
    • All columns regarding FastQC in General Statistics are now hidden by default. This should leave only rows with sample level metrics, however, there is a bug in MultiQC (Hide empty rows in General Statistics table when opening html file MultiQC/MultiQC#835) that hinders this. It can temporarily be fixed in the Web UI by checking and unchecking a FastQC column in "Configure Columns".
    • Bcl2fastq and Interop sections will now be shown first.
  • Project report: The FastQC % duplicates column is now hidden by default.
• An example command to run the nextflow pipeline has been added to the README.

[johandahlberg]

Great! This looks good to me. My one question is that since we don't use nextflow/config/multiqc_hwgs_config.yaml perhaps that should be removed?

[matrulda]

Yeah, I thought we might need it in future versions, but I guess we can just add it again if that's the case. I'll remove it.