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Avoid declaring (ion) state variables as global, see neuronsimulator/nrn/pull/1723 #1

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May 27, 2022
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Avoid declaring (ion) state variables as global, see neuronsimulator/nrn/pull/1723 #1

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Avoid declaring (ion) state variables as global, see neuronsimulator/…
pramodk May 23, 2022
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update readme
pramodk May 23, 2022
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13 changes: 9 additions & 4 deletions Readme.txt
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Expand Up @@ -14,14 +14,14 @@ neuromodulation in olfactory bulb. Journal of Neuroscience
33:3037-3058.

For questions, please email: [email protected]

The OB network model contains 25 mitral cells (MCs), 25 periglomerular
cells (PGs) and 100 granule cell (GCs)

The package contains five folders:

"celldata" folder to store data from single cell simulations
"data" folder to store data from network simulations
"data" folder to store data from network simulations
"SP" folder to store the timing of random background spikes to MCs
"Connection" folder to store the connectivity information between MCs
and GCs
Expand All @@ -48,7 +48,7 @@ NTCE = 1: Glomerular model without EPL (i.e., no granule cells)
NICOTIN = 0: nAChRs inactive
NICOTIN = 1: nAChRs activated
MUSCARIN = 0: mAChRs inactive
MUSCARIN = 1: mAChRs activated
MUSCARIN = 1: mAChRs activated

The default setting is the full model under the Control case (nAChRs
and mAChRs inactive)
Expand All @@ -61,3 +61,8 @@ PlotG.m: plot GABAa conductances
Raster.m: generate raster plots of spikes
LFP.m: frequency analysis of the sLFP
Phase.m: generate phase distribution plot and raster plot of spike phases

Changelog
---------
2022-05: Updated MOD files to compile with the latest neuron releases where
ion variables used as STATE can not be declared as GLOBAL.
2 changes: 1 addition & 1 deletion cadecay.mod
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Expand Up @@ -9,7 +9,7 @@ NEURON{
SUFFIX cad
USEION ca READ ica, cai WRITE cai
RANGE ica, channel_flow, depth, B
GLOBAL cai, tau, cainf
GLOBAL tau, cainf
}

UNITS {
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2 changes: 1 addition & 1 deletion cadecay2.mod
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Expand Up @@ -9,7 +9,7 @@ NEURON{
SUFFIX cad2
USEION ca READ ica, cai WRITE cai
RANGE ica, channel_flow, depth, B
GLOBAL cai, tau, cainf
GLOBAL tau, cainf
}

UNITS {
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