Build and release #69
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| name: Build and release | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| version_r: | |
| description: "R versions to build (36, 40, 41, 42, 43 valid; also 36,40,41,42,43 for all)" | |
| version_bioc: | |
| description: "Bioconductor versions to build (3.16, 3.17, 3.18 valid; also 3.16,3.17,3.18 for all)" | |
| version_create: | |
| description: "Version of image (vx (e.g. v1) or dev valid)" | |
| required: true | |
| default: "dev" | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| env: | |
| GH_TOKEN: ${{ secrets.GH_TOKEN }} | |
| steps: | |
| - name: Check out code | |
| uses: actions/checkout@v4 | |
| - name: Install apptainer | |
| run: .devcontainer/scripts/install-apptainer.sh | |
| - name: Build and release manually-selected versions of Rocker images | |
| if: github.event_name == 'workflow_dispatch' | |
| run: | | |
| echo "Creating new images for manually-selected versions of Rocker images" | |
| set -e | |
| IFS=',' read -ra VERSIONS_BASE <<< "${{ github.event.inputs.version_r }}" | |
| for VERSION_BASE in "${VERSIONS_BASE[@]}"; do | |
| echo "Building version $VERSION_BASE" | |
| IFS=',' read -ra VERSIONS_CREATE <<< "${{ github.event.inputs.version_create }}" | |
| for VERSION_CREATE in "${VERSIONS_CREATE[@]}"; do | |
| echo "Building version $VERSIONS_CREATE" | |
| ./build_and_release.sh r "$VERSION_BASE" "$VERSION_CREATE" | |
| done | |
| done | |
| - name: Build and release manually-selected versions of BioConductor images | |
| if: github.event_name == 'workflow_dispatch' | |
| run: | | |
| echo "Creating new images for manually-selected versions of Rocker images" | |
| set -e | |
| IFS=',' read -ra VERSIONS_BASE <<< "${{ github.event.inputs.version_bioc }}" | |
| for VERSION_BASE in "${VERSIONS_BASE[@]}"; do | |
| echo "Building version $VERSION_BASE" | |
| IFS=',' read -ra VERSIONS_CREATE <<< "${{ github.event.inputs.version_create }}" | |
| for VERSION_CREATE in "${VERSIONS_CREATE[@]}"; do | |
| echo "Building version $VERSIONS_CREATE" | |
| ./build_and_release.sh bioc "$VERSION_BASE" "$VERSION_CREATE" | |
| done | |
| done |