Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

add field for genome id to readme #21

Merged
merged 7 commits into from
Sep 10, 2020
Merged

add field for genome id to readme #21

Changes from 2 commits
Commits
Show all changes
7 commits
Select commit Hold shift + click to select a range
2aac30f
feat: add field for genome id to readme resolves #17
mihai-sysbio Sep 8, 2020
9b32df2
fix: allow Genome ID from any sources
haowang-bioinfo Sep 8, 2020
6050e32
refactor: clearer guidelines for the genome id
mihai-sysbio Sep 9, 2020
0ac317e
doc: add description for genome id
haowang-bioinfo Sep 10, 2020
c073c74
Merge branch 'feat/genome-id' into feat/genome-id
mihai-sysbio Sep 10, 2020
6b03d73
Merge pull request #24 from Hao-Chalmers/feat/genome-id
mihai-sysbio Sep 10, 2020
95ab066
Merge branch 'develop' into feat/genome-id
mihai-sysbio Sep 10, 2020
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 3 additions & 2 deletions README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -30,14 +30,15 @@ If you find this template does not fit your needs, we would appreciate if you co
#### Keywords

> Keywords are be separated by semicolons.
> The `Model source` field contains the source(s) of the current model, eg existing GEMs. If possible, use the Markdown format to add the URL with the DOI.
> The `Model source` field contains the source(s) of the current model, eg existing GEMs. If possible, use the Markdown format to add the URL with the DOI. For the genome identifier, please provide the ENA/GenBank/RefSeq identifier via *identifiers.org*.

**Utilisation:** {{ experimental data reconstruction; multi-omics integrative analysis;, _in silico_ strain design; model template }}
**Field:** {{ metabolic-network reconstruction }}
**Type of model:** {{ reconstruction; curated }}
**Model source:** {{ [YeastMetabolicNetwork](http://doi.org/10.1038/nbt1492) }}
**Omic source:** {{ genomics; metabolomics }}
**Taxonomy:** {{ _Saccharomyces cerevisiae_ }}
**Taxonomic name:** {{ _Saccharomyces cerevisiae_ }}
**Genome ID:** {{ [insdc.gca:GCA_000146045.2](https://identifiers.org/insdc.gca:GCA_000146045.2) }}
**Metabolic system:** {{ general metabolism }}
**Tissue:**
**Bioreactor:**
Expand Down