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SCIL multimodal MRI longitudinal database

The SCIL longitudinal multimodal MRI database is a single-center, repeated-measure study that collects multimodal MRI data with a high number of acquisitions over a short period of time in healthy subjects. This dataset includes :

  • anatomical image (3DT1)
  • multi-shell diffusion weighted images (DWI)
  • inhomogeneous MT images (ihMT - MTI)

This site provides a description of the average values for MRI measurements that can be generated by the tools developed by the Sherbrooke Connectivity Imaging Lab (SCIL)

SCIL tools

The SCIL tools are open-source here: scilpy. Full documentation, including installation, a description of the scilpy tools and pipelines can be found SCIL documentation.

Tools used for images processing are listed below and available on SCIL github :

Publications

A description of the variability and consistency of MRI measurements over time has been published:

Edde M., Theaud G., [...] and Descoteaux M. High-frequency longitudinal white matter diffusion- & myelin-based MRI database: reliability and variability, currently. https://onlinelibrary.wiley.com/doi/10.1002/hbm.26310

:download:`PDF<./download/Edde2023_HBM_HighFrequencyLongitudinal.pdf>`

Results of consistency analyzes could also be find here.

.. toctree::
   :maxdepth: 1
   :caption: Database

   database/data_description

.. toctree::
   :maxdepth: 1
   :caption: Pipeline

   pipeline/mri_processing
   pipeline/evaluation_metrics

.. toctree::
   :maxdepth: 1
   :caption: Whole brain

   whole_brain/average_maps
   whole_brain/scatter
   whole_brain/boxplot

.. toctree::
  :maxdepth: 1
  :caption: Bundles

  bundles/af

.. toctree::
  :maxdepth: 1
  :caption: Download

  data/download

  .. toctree::
  :maxdepth: 1
  :caption: Data Sharing

  data/sharing_policy


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POC RTD for SCIL lab pipeline on myeloinferno database

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