Python Interfaces for matRad

This repository contains python interfaces for running dose calculation and other functions from the matRad codebase.

An updated/tested installation script is provided for linux systems that runs matrad on octave and installs all dependencies.

Heavily sourced from matRAD (https://github.com/e0404/matRad)

Install Instructions

matRad Installation

First fetch the submodule

git submodule update --init --recursive

For Linux systems,

cd matRad
bash before_install_linux.sh

The dependencies have been updated and are different from the ones on the matRad master. Warning: This has only been tested on linux operating systems

Python wrapper dependencies

pip install -r requirements.txt

Sample scripts

For sample scripts check the projects directory. This contains code used for different projects. Code can be found for gamma calculation, dose calculation etc.

Repo structure

- matrad # modified version of the matrad github repository at a specific commit 
- pyrad # interfaces, source code and utils for python interfaces for matrad
- projects # Example scripts for different purposes within a project
...