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Release 2018.10.15
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@alchemistmatt alchemistmatt released this 15 Oct 18:42
· 293 commits to master since this release
v2018.10.15
843235e

MSGFPlus_v20181015.zip has:

File Description Requirements
MSGFPlus.jar MS-GF+ search engine Java runtime
MzidToTsvConverter.exe Converts .mzid files to a tab-delimited text file .NET Runtime 4.6.2 or newer
Documentation files HTML files explaining how to use the software n/a
Example files Example modification files and example results n/a

Changes in this release:

  • Parse the elution time (retention time) from Mascot Generic Format (.mgf) files if defined using RTINSECONDS
  • Parse out scan numbers from the TITLE line of .mgf files created by msconvert (part of ProteoWizard)

These changes will result in .mzid files having two new entries for each spectrum, for example

  <cvParam cvRef="PSI-MS" accession="MS:1001115" name="scan number(s)" value="19446"/>
  <cvParam cvRef="PSI-MS" accession="MS:1000016" name="scan start time" value="3163.3267" unitAccession="UO:0000010" unitName="second" unitCvRef="UO"/>
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