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Tidying Universe.__init__ #2322

Merged
merged 20 commits into from
Feb 16, 2020
Merged

Tidying Universe.__init__ #2322

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3ffaf75
added universe classmethods
Jun 25, 2019
7d0da8c
added class decorator
Jun 26, 2019
05b4bf2
passing tests except empty
Jun 27, 2019
f167c75
added universe classmethods
Jun 25, 2019
14446c3
added class decorator
Jun 26, 2019
fb3b56c
passing tests except empty
Jun 27, 2019
f8f1f48
removed vscode
Aug 8, 2019
205cf98
updated empty and warning tests
Aug 19, 2019
8d8edd7
removed old changes
Aug 19, 2019
5ccdc25
removed classmethods
Aug 19, 2019
cf30e8b
removed commented stuff
Aug 21, 2019
f53d6f9
updated docstrings
Aug 21, 2019
1f9eb59
moved gen_from_top out
Sep 22, 2019
f7c9297
updated CHANGELOG
Sep 22, 2019
4d0ccdf
changed topology to kwarg
lilyminium Feb 13, 2020
9250f31
rebased and corrected for new tests
lilyminium Feb 13, 2020
354ee95
added error to Universe.__init__
lilyminium Feb 14, 2020
d28ef33
butchered function signatures for py2
richardjgowers Feb 16, 2020
b3a8525
update changelog
richardjgowers Feb 16, 2020
ec4172c
Merge branch 'develop' into universe-clsmethods
richardjgowers Feb 16, 2020
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3 changes: 3 additions & 0 deletions package/CHANGELOG
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Original file line number Diff line number Diff line change
Expand Up @@ -86,6 +86,8 @@ Enhancements
* Improve the distance search in water bridge analysis with capped_distance (PR #2480)

Changes
* Calling Universe() now raises a TypeError advising you to use Universe.empty.
Universe.empty() now no longer has n_atoms=0 as default. (Issue #2527)
* deprecated `start`, `stop`, and `step` keywords have been removed from `__init__`
in :class:`AnalysisBase`. These should now be called in :meth:`AnalysisBase.run`
(Issue #1463)
Expand Down Expand Up @@ -123,6 +125,7 @@ Changes
Deprecations
* analysis.hbonds.HydrogenBondAnalysis is deprecated in 1.0 (remove in 2.0)


09/05/19 IAlibay, richardjgowers

* 0.20.1
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