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kain88-de committed Mar 28, 2016
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Showing 1 changed file with 3 additions and 4 deletions.
7 changes: 3 additions & 4 deletions package/MDAnalysis/analysis/contacts.py
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Expand Up @@ -283,11 +283,10 @@ class Contacts(AnalysisBase):
Parameter choices
-----------------
There are recommendations and not strict orders.
There are recommendations and not strict orders.
These parameters should be insensitive to small changes.
* For all-atom simulations, radius = 4.5 A and lambda_constant = 1.8 (unitless)
* For coarse-grained simulations, radius = 6.0 A and lambda_constant = 1.5 (unitless)
* For all-atom simulations, radius = 4.5 A
* For coarse-grained simulations, radius = 6.0 A
"""
def __init__(self, u, selection, refgroup, method="cutoff", radius=4.5,
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