Merge branch 'rdkit-converter' of https://github.com/cbouy/mdanalysis …

…into rdkit-converter

package/AUTHORS

@@ -148,6 +148,7 @@ Chronological list of authors
   - William Glass
   - Marcello Sega
   - Edis Jakupovic
+  - Nicholas Craven
 
 External code
 -------------

package/CHANGELOG

@@ -14,11 +14,14 @@ The rules for this file:
 
 ------------------------------------------------------------------------------
 ??/??/?? tylerjereddy, richardjgowers, IAlibay, hmacdope, orbeckst, cbouy,
-         lilyminium, daveminh, jbarnoud, yuxuanzhuang, VOD555, ianmkenney
+         lilyminium, daveminh, jbarnoud, yuxuanzhuang, VOD555, ianmkenney, 
+         calcraven， xiki-tempula
 
   * 2.0.0
 
 Fixes
+  * Fixed reading in masses and charges from a hoomdxml file
+    (Issue #2888, PR #2889)
   * Bond attribute is no longer set if PDB file contains no CONECT records
     (Issue #2832)
   * ResidueAttrs now have Atom as a target class by default; ICodes and
@@ -40,7 +43,9 @@ Fixes
     was thrown when finding D-H pairs via the topology if `hydrogens` was an
     empty AtomGroup (Issue #2848)
   * Fixed the DMSParser, allowing the creation of multiple segids sharing
-    residues with identical resids (Issue #1387, PR #2872)    
+    residues with identical resids (Issue #1387, PR #2872)
+  * H5MD files are now pickleable with H5PYPicklable (Issue #2890, PR #2894)
+  * Fixed Janin analysis residue filtering (include CYSH) (Issue #2898)
 
 Enhancements
   * Refactored analysis.helanal into analysis.helix_analysis
@@ -64,6 +69,9 @@ Enhancements
   * Dead code removed from the TPR parser and increased test coverage (PR #2840)
   * TPR parser exposes the elements topology attribute (PR #2858, see Issue #2553)
   * Added `H5MDReader` to coordinate readers (Issue #762, PR #2787)
+  * Added new kwargs `select_remove` and `select_protein` to
+    analysis.dihedrals.Janin analysis to give user more fine grained control
+    over selections (PR #2899)
   * Added an RDKit converter that works for any input with all hydrogens
     explicit in the topology (Issue #2468, PR #2775)
 
@@ -89,6 +97,7 @@ Changes
   * Changes the minimal NumPy version to 1.16.0 (Issue #2827, PR #2831)
   * Sets the minimal RDKit version for CI to 2020.03.1 (Issue #2827, PR #2831)
   * Removes deprecated waterdynamics.HydrogenBondLifetimes (PR #2842)
+  * Make NeighborSearch return empty atomgroup, residue, segments instead of list (Issue #2892, PR #2907)
 
 Deprecations