removed references to nose

.travis.yml

@@ -28,17 +28,14 @@ env:
     # Set default python version to avoid repetition later
     - BUILD_DOCS=false
     - COVERALLS=false
-    - NOSE_FLAGS="--processes=2 --process-timeout=400 --no-open-files --with-timer --timer-top-n 50"
-    - NOSE_TEST_LIST=""
     - PYTEST_FLAGS="--disable-pytest-warnings --numprocesses 2 --durations=50"
     - PYTEST_LIST="testsuite/MDAnalysisTests/lib testsuite/MDAnalysisTests/formats testsuite/MDAnalysisTests/coordinates testsuite/MDAnalysisTests/utils testsuite/MDAnalysisTests/topology testsuite/MDAnalysisTests/auxiliary testsuite/MDAnalysisTests/core testsuite/MDAnalysisTests/analysis"
-    - NOSE_COVERAGE_FILE="nose_coverage"
     - PYTEST_COVERAGE_FILE="pytest_coverage"
     - MAIN_CMD="pytest ${PYTEST_LIST}"
     - SETUP_CMD="${PYTEST_FLAGS}"
     - BUILD_CMD="pip install -v package/ && pip install testsuite/"
-    - CONDA_DEPENDENCIES="mmtf-python nose=1.3.7 mock six biopython networkx cython joblib nose-timer matplotlib scipy griddataformats hypothesis"
-    - CONDA_ALL_DEPENDENCIES="mmtf-python nose=1.3.7 mock six biopython networkx cython joblib nose-timer matplotlib netcdf4 scikit-learn scipy griddataformats seaborn coveralls clustalw=2.1  hypothesis"
+    - CONDA_DEPENDENCIES="mmtf-python mock six biopython networkx cython joblib matplotlib scipy griddataformats hypothesis"
+    - CONDA_ALL_DEPENDENCIES="mmtf-python mock six biopython networkx cython joblib matplotlib netcdf4 scikit-learn scipy griddataformats seaborn coveralls clustalw=2.1  hypothesis"
     # Install griddataformats from PIP so that scipy is only installed in the full build (#1147)
     - PIP_DEPENDENCIES=''
     - CONDA_CHANNELS='biobuilds conda-forge'
@@ -80,7 +77,6 @@ matrix:
 
     - os: linux
       env: NAME='full'
-           NOSE_COVERAGE='--with-coverage --cover-package MDAnalysis'
            PYTEST_COVERAGE='--cov=MDAnalysis'
            SETUP_CMD="${PYTEST_FLAGS} ${PYTEST_COVERAGE}"
            CONDA_DEPENDENCIES=${CONDA_ALL_DEPENDENCIES}