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update master with develop#185

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lilyminium merged 30 commits intomasterMDAnalysis/UserGuide:masterfrom developMDAnalysis/UserGuide:developCopy head branch name to clipboardJan 26, 2022

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Commits

Commits on Apr 9, 2021

• Pin versions to develop (#144)

  lilyminium

  authored
  c029784

Commits on Jun 21, 2021

• Pin jinja2 version (#169)

  IAlibay

  authored
  c249026

• Add helix analysis notebook (#126)

  lilyminium

  authored
  c839440

• Fix installation instructions (#161)

  lilyminium

  authored
  1fa759d

Commits on Jun 23, 2021

• Example notebooks for HydrogenBondAnalysis (#133)

  Show description for f789446
  

  Paul Smith

  authored
  f789446

Commits on Jan 21, 2022

• flatten pc.mean in PCA projection tutorial (#184)

  orbeckst

  authored
  fef611e

Commits on Jan 22, 2022

• Add examples of selecting groups from other groups

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  mieczyslaw

  authored and

  lilyminium

  committed
  3e87740

• Documents for parallel analysis (#102)

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  yuxuanzhuang

  authored and

  lilyminium

  committed
  0df424f

• Change intersphinx link to latest objects.inv (#107)

  lilyminium

  committed
  0662a8c

• Contacts (#84)

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  lilyminium

  committed
  1487ad1

• updated align (#73)

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  lilyminium

  committed
  4187264

• Move quickstart up to top level (#113)

  lilyminium

  committed
  ae6b5fe

• Add readthedocs config (#68)

  lilyminium

  committed
  2ffad0a

• Add and fix links to API docs and Quickstart (#129)

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  lilyminium

  committed
  8903379

• Update general notebooks (#124)

  lilyminium

  committed
  21ec860

• Update README.rst

  Show description for d9f7508
  lilyminium

  committed
  d9f7508

• Use RTD to make PDF of the docs (#135)

  lilyminium

  committed
  4803383

• Remove whitespace (#145)

  lilyminium

  committed
  fb08ba0

• Update pca (#120)

  lilyminium

  committed
  547ef0b

• Update install and selection notes (#127)

  lilyminium

  committed
  6b1104b

• add okwarnings (#162)

  lilyminium

  committed
  b77c3f2

• Add Binder badge to examples (#131)

  lilyminium

  committed
  e73bdee

• Add new notebooks (#125)

  lilyminium

  committed
  566937b

• fix sitemap (#173)

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  orbeckst

  and

  lilyminium

  committed
  be59ad8

• fix broken link in transformations

  Show description for 3b73498
  

  orbeckst

  authored and

  lilyminium

  committed
  3b73498

• fix links in transformations (#179)

  

  orbeckst

  authored and

  lilyminium

  committed
  d6250c5

• Fix broken link to MDAnalysisData (#180)

  

  hmacdope

  authored and

  lilyminium

  committed
  380dd66

• Add UserGuide example of custom compiler flags march=native build (#177)

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  hmacdope

  and

  lilyminium

  committed
  38bba55

• Merge pull request #186 from MDAnalysis/port-master

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  5 peopleauthored
  120b031

• Merge branch 'master' into develop

  lilyminium

  committed
  53079fa