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Publish 1.0 version #70

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orbeckst opened this issue Jun 11, 2020 · 5 comments
Closed

Publish 1.0 version #70

orbeckst opened this issue Jun 11, 2020 · 5 comments
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version-1.0 Contains 1.0 features

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@orbeckst
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With 1.0 released MDAnalysis/mdanalysis#2443 there should also be the 1.0 version of the user guide online. At the moment it is 0.20.1.
@orbeckst orbeckst added the version-1.0 Contains 1.0 features label Jun 11, 2020
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lilyminium commented Jun 14, 2020 •
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ANALYSIS: REVIEW

  • aligning structures -- mention match_atoms etc: updated align #73
  • rms -- added weights_groupselections Update rms notebooks #75
  • contacts.Contacts -- added radius_cut_q Contacts #84
  • encore -- dres returns dimensionality reduction details instead of reference to self. hes does not accept details keyword anymore.
  • polymer.PersistenceLength
  • PCA (now correctly aligns; also some other fun new methods)
  • GNM -- removed MassWeight option

ANALYSIS: ADD

  • align.AverageStructure
  • HydrogenBondAnalysis
  • hole2
  • DensityAnalysis

OTHER: ADD

  • ParmEd
  • Notebook execution scripts
  • other scripts; add to conf.py

@lilyminium lilyminium self-assigned this Jun 14, 2020
@orbeckst
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I think you can close it... I see https://userguide.mdanalysis.org/

@lilyminium
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Yeah, I was going to make my way down the #70 (comment) checklist and close some other issues but it has been quite slow going...

@orbeckst
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I would open a new issue for the checklist – that will allow you to get the warm, fuzzy feeling from closing this issue!

(Never mind that you will have opened another one...)

@orbeckst
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orbeckst commented Aug 8, 2020

I moved the laundry lists to #98 and #99 so that I can close this issue.

closed issues    -1
opened issues    +2
--------------------
net issues       +1

☹️

@orbeckst orbeckst closed this as completed Aug 8, 2020
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