flatten pc.mean in PCA projection tutorial (#184)

MDAnalysis · Jan 21, 2022 · fef611e · fef611e
1 parent f789446
commit fef611e
Showing 1 changed file with 5 additions and 5 deletions.
diff --git a/doc/source/examples/analysis/reduced_dimensions/pca.ipynb b/doc/source/examples/analysis/reduced_dimensions/pca.ipynb
@@ -468,7 +468,7 @@
    "source": [
     "pc1 = pc.p_components[:, 0]\n",
     "trans1 = transformed[:, 0]\n",
-    "projected = np.outer(trans1, pc1) + pc.mean\n",
+    "projected = np.outer(trans1, pc1) + pc.mean.flatten()\n",
     "coordinates = projected.reshape(len(trans1), -1, 3)"
    ]
   },
@@ -593,9 +593,9 @@
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python (mda-user-guide)",
+   "display_name": "Python 3 (ipykernel)",
    "language": "python",
-   "name": "mda-user-guide"
+   "name": "python3"
   },
   "language_info": {
    "codemirror_mode": {
@@ -607,7 +607,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.8.3"
+   "version": "3.8.12"
   },
   "toc": {
    "base_numbering": 1,
@@ -16308,5 +16308,5 @@
   }
  },
  "nbformat": 4,
- "nbformat_minor": 2
+ "nbformat_minor": 4
 }