add cartopy to requirements and add rasterio_io back to tests, #24

autotest/test_02_on_topic.py

@@ -3,268 +3,263 @@
 
 # make projectdir accessible inside this script
 tst_dir = os.path.dirname(os.path.realpath(__file__))
-nb_dir = os.path.join(tst_dir, "..", *('Exercise_notebooks', 'On_topic'))
+nb_dir = os.path.join(tst_dir, "..", *("Exercise_notebooks", "On_topic"))
 
 
 def test_03_pandas_methods_vs_functions():
-    fpath_rel = ['01_Pandas', '03_pandas_methods_vs_functions.ipynb']
+    fpath_rel = ["01_Pandas", "03_pandas_methods_vs_functions.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_04_py_exploratory_comp_8():
-    fpath_rel = ['01_Pandas', '04_py_exploratory_comp_8.ipynb']
+    fpath_rel = ["01_Pandas", "04_py_exploratory_comp_8.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_01_matplotlib():
-    fpath_rel = ['02_matplotlib', '01_matplotlib.ipynb']
+    fpath_rel = ["02_matplotlib", "01_matplotlib.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_02_py_exploratory_comp_1():
-    fpath_rel = ['02_matplotlib', '02_py_exploratory_comp_1.ipynb']
+    fpath_rel = ["02_matplotlib", "02_py_exploratory_comp_1.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_01_for_loops_basic():
-    fpath_rel = ['03_for_loops', '01_for-loops_basic.ipynb']
+    fpath_rel = ["03_for_loops", "01_for-loops_basic.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_02_for_loops():
-    fpath_rel = ['03_for_loops', '02_for_loops.ipynb']
+    fpath_rel = ["03_for_loops", "02_for_loops.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_01_conditionals():
-    fpath_rel = ['04_if_statements', '01_conditionals.ipynb']
+    fpath_rel = ["04_if_statements", "01_conditionals.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_01_numpy():
-    fpath_rel = ['05_Numpy', '01-numpy.ipynb']
+    fpath_rel = ["05_Numpy", "01-numpy.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_02_linear_equations_mb6():
-    fpath_rel = ['05_Numpy', '02-linear_equations_mb6.ipynb']
+    fpath_rel = ["05_Numpy", "02-linear_equations_mb6.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_02_functions():
-    fpath_rel = ['06_Functions', '02_functions.ipynb']
+    fpath_rel = ["06_Functions", "02_functions.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_01_py_exploratory_comp_12_sol():
-    fpath_rel = ['07_Object_oriented', '01_py_exploratory_comp_12_sol.ipynb']
+    fpath_rel = ["07_Object_oriented", "01_py_exploratory_comp_12_sol.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_02_classes():
-    fpath_rel = ['07_Object_oriented', '02_classes.ipynb']
+    fpath_rel = ["07_Object_oriented", "02_classes.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_03___theorievoorbeeld():
-    fpath_rel = ['07_Object_oriented', '03 - theorievoorbeeld.ipynb']
+    fpath_rel = ["07_Object_oriented", "03 - theorievoorbeeld.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_Geopandas():
-    fpath_rel = ['08_GIS', 'Geopandas.ipynb']
+    fpath_rel = ["08_GIS", "Geopandas.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_GIS_pyshp():
-    fpath_rel = ['08_GIS', 'GIS_pyshp.ipynb']
+    fpath_rel = ["08_GIS", "GIS_pyshp.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
-# # Test turned off due to dependency issues.
-# # Notebook does work, just not in the test.
-# def test_introduction_raster_IO():
-#     fpath_rel = ['08_GIS', 'introduction_raster_IO.ipynb']
-#     fname = os.path.join(nb_dir, *fpath_rel)
-#     tf.run_notebook(fname, clearoutput=False)
+def test_introduction_raster_IO():
+    fpath_rel = ["08_GIS", "introduction_raster_IO.ipynb"]
+    fname = os.path.join(nb_dir, *fpath_rel)
+    tf.run_notebook(fname, clearoutput=False)
 
 
 def test_01_best_practices():
-    fpath_rel = ['09_Code_Quality', '01_best_practices.ipynb']
+    fpath_rel = ["09_Code_Quality", "01_best_practices.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_03_Quality_ZEN_of_Python():
-    fpath_rel = ['09_Code_Quality', '03_Quality_ZEN_of_Python.ipynb']
+    fpath_rel = ["09_Code_Quality", "03_Quality_ZEN_of_Python.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_idiomatic_dicts():
-    fpath_rel = ['09_Code_Quality', '04_idiomatic', 'idiomatic_dicts.ipynb']
+    fpath_rel = ["09_Code_Quality", "04_idiomatic", "idiomatic_dicts.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_idiomatic_loops():
-    fpath_rel = ['09_Code_Quality', '04_idiomatic', 'idiomatic_loops.ipynb']
+    fpath_rel = ["09_Code_Quality", "04_idiomatic", "idiomatic_loops.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_idiomatic_misc1():
-    fpath_rel = ['09_Code_Quality', '04_idiomatic', 'idiomatic_misc1.ipynb']
+    fpath_rel = ["09_Code_Quality", "04_idiomatic", "idiomatic_misc1.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_idiomatic_misc2():
-    fpath_rel = ['09_Code_Quality', '04_idiomatic', 'idiomatic_misc2.ipynb']
+    fpath_rel = ["09_Code_Quality", "04_idiomatic", "idiomatic_misc2.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_idiomatic_python_exercise():
-    fpath_rel = [
-        '09_Code_Quality', '04_idiomatic',
-        'idiomatic_python_exercise.ipynb'
-        ]
+    fpath_rel = ["09_Code_Quality", "04_idiomatic", "idiomatic_python_exercise.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_03_lists():
-    fpath_rel = ['10_data_types', 'collections', '03_lists.ipynb']
+    fpath_rel = ["10_data_types", "collections", "03_lists.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_04_dictionaries():
-    fpath_rel = ['10_data_types', 'collections', '04_dictionaries.ipynb']
+    fpath_rel = ["10_data_types", "collections", "04_dictionaries.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_01_numbers():
-    fpath_rel = ['10_data_types', 'numbers', '01_numbers.ipynb']
+    fpath_rel = ["10_data_types", "numbers", "01_numbers.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_02_strings():
-    fpath_rel = ['10_data_types', 'strings', '02_strings.ipynb']
+    fpath_rel = ["10_data_types", "strings", "02_strings.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_02_file_io():
-    fpath_rel = ['11_read_write_text_files', '02_file_io.ipynb']
+    fpath_rel = ["11_read_write_text_files", "02_file_io.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_03_files():
-    fpath_rel = ['11_read_write_text_files', '03-files.ipynb']
+    fpath_rel = ["11_read_write_text_files", "03-files.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_05_input_output():
-    fpath_rel = ['11_read_write_text_files', '05-input-output.ipynb']
+    fpath_rel = ["11_read_write_text_files", "05-input-output.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_02_IntroSQLJoins():
-    fpath_rel = ['12_Databases', '02-IntroSQLJoins.ipynb']
+    fpath_rel = ["12_Databases", "02-IntroSQLJoins.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_scipy_optimize_mb5():
-    fpath_rel = ['13_scipy_optimize', 'scipy_optimize_mb5.ipynb']
+    fpath_rel = ["13_scipy_optimize", "scipy_optimize_mb5.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_scipy_optimize_mb5_sol():
-    fpath_rel = ['13_scipy_optimize', 'scipy_optimize_mb5_sol.ipynb']
+    fpath_rel = ["13_scipy_optimize", "scipy_optimize_mb5_sol.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_05_exceptions():
-    fpath_rel = ['14_warnings_and_errors', '05_exceptions.ipynb']
+    fpath_rel = ["14_warnings_and_errors", "05_exceptions.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_01_datetime():
-    fpath_rel = ['15_datetime', '01_datetime.ipynb']
+    fpath_rel = ["15_datetime", "01_datetime.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_01_debugging():
-    fpath_rel = ['16_debugging', '01-debugging.ipynb']
+    fpath_rel = ["16_debugging", "01-debugging.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_02_debugging():
-    fpath_rel = ['16_debugging', '02-debugging.ipynb']
+    fpath_rel = ["16_debugging", "02-debugging.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_01_testing_dutch():
-    fpath_rel = ['18_testing', '01_testing_dutch.ipynb']
+    fpath_rel = ["18_testing", "01_testing_dutch.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_02_testing2():
-    fpath_rel = ['18_testing', '02-testing2.ipynb']
+    fpath_rel = ["18_testing", "02-testing2.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_03_testing3():
-    fpath_rel = ['18_testing', '03-testing3.ipynb']
+    fpath_rel = ["18_testing", "03-testing3.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_1_basic_pastas_model():
-    fpath_rel = ['19_pastas', '1_basic_pastas_model.ipynb']
+    fpath_rel = ["19_pastas", "1_basic_pastas_model.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_2_external_stresses():
-    fpath_rel = ['19_pastas', '2_external_stresses.ipynb']
+    fpath_rel = ["19_pastas", "2_external_stresses.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
 
 def test_3_stressmodels():
-    fpath_rel = ['19_pastas', '3_stressmodels.ipynb']
+    fpath_rel = ["19_pastas", "3_stressmodels.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)
 
@@ -277,6 +272,6 @@ def test_3_stressmodels():
 
 
 def test_02_modules_and_packages():
-    fpath_rel = ['20_modules_and_packages', '02_modules_and_packages.ipynb']
+    fpath_rel = ["20_modules_and_packages", "02_modules_and_packages.ipynb"]
     fname = os.path.join(nb_dir, *fpath_rel)
     tf.run_notebook(fname, clearoutput=False)

requirements.txt

@@ -24,4 +24,5 @@ geographiclib
 networkx
 gpxpy
 pyshp
-textblob
+textblob
+cartopy