sRNA-tool-kit-python

Frequency Analyzer

Takes an arbitrary number of input files and analyzes there word frequencies.

Getting Started

Run

py FrequencyAnalyzer.py outputFile.path input1.file input2.file inputN.file

in console.

For Example:

py FrequencyAnalyzer.py output.csv sel1-1_S2.input sel1-1_S9.input

Prerequisites

Input files need to have one word per line. lines with bad content or having lengths other than specified in the Settings are ignored.

Result Filter

Filters words that were not seen in all specified result files

Getting Started

Run

py FilterResult.py filteredOutput.csv inputFile.csv [1,2,..,N]

in console.

For Example:

py FilterResult.py filteredOutput.csv inputFile.csv [1,2,7]

Prerequisites

Input file needs to specify a sperator within first line.

Authors

• Daniel Graf Hoyos - Initial work - Loxos