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make samtools/convert follow output guidelines (#5060) #6

make samtools/convert follow output guidelines (#5060)

make samtools/convert follow output guidelines (#5060) #6

Triggered via push March 7, 2024 11:32
Status Failure
Total duration 2d 13h 5m 40s
Artifacts

test.yml

on: push
nf-test-changes
5s
nf-test-changes
pytest-changes
5s
pytest-changes
pre-commit
13s
pre-commit
Matrix: nf-test
Matrix: nf-core-lint
Matrix: pytest
confirm-pass
0s
confirm-pass
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13 errors and 3 warnings
nf-core-lint (optitype)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
nf-core-lint (samtools/convert)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
nf-test (glimpse2/chunk, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
nf-test (glimpse2/chunk, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
nf-core-lint (glimpse2/chunk)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
nf-test (glimpse2/chunk, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
nf-test (samtools/convert, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
nf-test (optitype, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
nf-test (samtools/convert, singularity)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
nf-test (samtools/convert, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
nf-test (optitype, conda)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
nf-test (optitype, docker)
This request was automatically failed because there were no enabled runners online to process the request for more than 1 days.
confirm-pass
Process completed with exit code 1.
pytest-changes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: mirpedrol/paths-filter@main. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
nf-test-changes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: mirpedrol/paths-filter@main. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
pre-commit
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.