Tests for mac #207
Workflow file for this run
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| name: continuous-integration | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| - releases/* | |
| pull_request: null | |
| env: | |
| CACHE_NUMBER: 0 # increase to reset cache manually | |
| CONDA_ENV: .github/environment.yml | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [macos-latest, ubuntu-latest] | |
| include: | |
| - os: macos-latest | |
| label: osx-64 | |
| prefix: /Users/runner/miniconda3 | |
| - os: ubuntu-latest | |
| label: linux-64 | |
| prefix: /usr/share/miniconda3 | |
| steps: | |
| # - name: Cancel previous runs | |
| # uses: styfle/[email protected] | |
| # with: | |
| # access_token: ${{ github.token }} | |
| - name: Checkout NaMaster repository | |
| uses: actions/checkout@v4 | |
| - name: Set up conda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| channels: conda-forge, defaults | |
| channel-priority: strict | |
| show-channel-urls: true | |
| miniforge-version: latest | |
| miniforge-variant: Mambaforge | |
| # - name: conda libraries in path | |
| # run: | | |
| # export CFLAGS+=" -I${CONDA_PREFIX}/include" | |
| # export CPPFLAGS+=" -I${CONDA_PREFIX}/include" | |
| # export LDFLAGS+=" -I${CONDA_PREFIX}/lib" | |
| # export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:${CONDA_PREFIX}/lib | |
| # - name: "macOS: set env variables" | |
| # if: matrix.label == 'osx-64' | |
| # run: | | |
| # #mamba install llvm-openmp | |
| # echo "DYLD_FALLBACK_LIBRARY_PATH=${CONDA_PREFIX}/lib" >> $GITHUB_ENV | |
| # SDKROOT=$(xcrun --sdk macosx --show-sdk-path) | |
| # echo "SDKROOT: ${SDKROOT}" | |
| # echo "SDKROOT=${SDKROOT}" >> $GITHUB_ENV | |
| # echo "CONDA_BUILD_SYSROOT=${SDKROOT}" >> $GITHUB_ENV | |
| # | |
| # export CFLAGS="-I/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/include" | |
| # export LDFLAGS="-L/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk/usr/lib" | |
| - name: Set current date as environment variable | |
| run: echo "TODAY=$(date +'%Y.%m.%d')" >> $GITHUB_ENV | |
| - name: Get cached environment | |
| uses: actions/cache@v3 | |
| id: cache | |
| with: | |
| path: ${{ matrix.prefix }} | |
| key: | |
| conda-py${{ matrix.py }}--${{ | |
| matrix.os }}--${{ | |
| hashFiles(env.CONDA_ENV) }}-${{ | |
| hashFiles('setup.py') }}--${{ | |
| env.TODAY }}-${{ | |
| env.CACHE_NUMBER }} | |
| - name: Install environment packages | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| run: | | |
| export MAMBA_NO_BANNER=1 # hide mamba banner from output | |
| mamba env update --file ${{ env.CONDA_ENV }} --prune | |
| - name: Show installed | |
| run: conda list | |
| - name: Install fitsio | |
| run: | | |
| sudo -H apt-get install libcfitsio-dev | |
| - name: Flake | |
| run: | | |
| flake8 pymaster --exclude=nmtlib.py | |
| flake8 test --exclude=benchmarks | |
| - name: Build NaMaster | |
| run: | | |
| python setup.py install | |
| - name: C tests | |
| run: | | |
| make check | |
| - name: Python tests | |
| run: | | |
| pytest -vv pymaster --cov=pymaster | |
| # - name: Clean install with threads | |
| # run: | | |
| # pip uninstall pymaster -y | |
| # rm _deps/lib/libnmt.a | |
| # python setup.py install --enable-fftw-pthreads --disable-openmp | |
| # | |
| # - name: C tests with threads | |
| # run: | | |
| # make check | |
| # | |
| # - name: Python tests with threads | |
| # run: | | |
| # pytest -vv pymaster | |
| # | |
| - name: coveralls | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| coveralls --service=github |