Anisotropic masks #317
Workflow file for this run
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| name: continuous-integration | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - master | |
| - releases/* | |
| pull_request: null | |
| env: | |
| CACHE_NUMBER: 0 # increase to reset cache manually | |
| CONDA_ENV: .github/environment.yml | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [macos-latest, ubuntu-latest] | |
| include: | |
| - os: macos-latest | |
| label: osx-64 | |
| prefix: /Users/runner/miniconda3 | |
| - os: ubuntu-latest | |
| label: linux-64 | |
| prefix: /usr/share/miniconda3 | |
| steps: | |
| - name: Cancel previous runs | |
| uses: styfle/[email protected] | |
| with: | |
| access_token: ${{ github.token }} | |
| - name: Checkout NaMaster repository | |
| uses: actions/checkout@v4 | |
| - name: Set up conda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| channels: conda-forge, defaults | |
| channel-priority: strict | |
| show-channel-urls: true | |
| miniforge-version: latest | |
| miniforge-variant: Mambaforge | |
| - name: Set current date as environment variable | |
| run: echo "TODAY=$(date +'%Y.%m.%d')" >> $GITHUB_ENV | |
| - name: Get cached environment | |
| uses: actions/cache@v3 | |
| id: cache | |
| with: | |
| path: ${{ matrix.prefix }} | |
| key: | |
| conda-py${{ matrix.py }}--${{ | |
| matrix.os }}--${{ | |
| hashFiles(env.CONDA_ENV) }}-${{ | |
| hashFiles('setup.py') }}--${{ | |
| env.TODAY }}-${{ | |
| env.CACHE_NUMBER }} | |
| - name: Install environment packages | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| run: | | |
| export MAMBA_NO_BANNER=1 # hide mamba banner from output | |
| mamba env update --file ${{ env.CONDA_ENV }} --prune | |
| - name: Show installed | |
| run: conda list | |
| - name: conda libraries in path | |
| run: | | |
| ls ${CONDA_PREFIX}/lib | |
| ls ${CONDA_PREFIX}/include | |
| - name: Install fitsio, fftw (ubuntu) | |
| if: matrix.label == 'linux-64' | |
| run: | | |
| sudo -H apt-get install libcfitsio-dev libfftw3-dev | |
| - name: Install other dependencies (mac) | |
| if: matrix.label == 'osx-64' | |
| run: | | |
| brew install fftw | |
| # Unclear why, but we don't seem to have to install gsl | |
| # for linux, only mac... | |
| brew install gsl | |
| brew install openblas | |
| brew install libomp | |
| brew install cfitsio | |
| brew install autoconf | |
| brew install automake | |
| brew install libtool | |
| # Annoyingly, the version of healpy that gets | |
| # installed by pip when installing namaster seems | |
| # to crash on mac, so we install it here instead | |
| conda install healpy | |
| - name: Build NaMaster (ubuntu) | |
| if: matrix.label == 'linux-64' | |
| run: | | |
| python setup.py install | |
| - name: Build NaMaster (mac) | |
| if: matrix.label == 'osx-64' | |
| run: | | |
| # After migrating to Xcode 15.4, a bunch of things broke, for whatever reason... | |
| sudo xcode-select -s "/Applications/Xcode_15.0.1.app" | |
| # Without the prefixes, it won't compile on mac | |
| CC=gcc-14 LDFLAGS=-L/opt/homebrew/lib CPPFLAGS=-I/opt/homebrew/include python -m pip install . | |
| - name: C tests | |
| run: | | |
| make check | |
| - name: Python tests | |
| run: | | |
| pytest -vv pymaster --cov=pymaster | |
| - name: coveralls | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| coveralls --service=github | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout CCL repository | |
| uses: actions/checkout@v3 | |
| - name: Lint | |
| uses: py-actions/flake8@v2 | |
| with: | |
| args: "--config .flake8" |