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improve cat design / performance
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This used to make a lot of references to design issues with the
SparseArrays package (#2326 /
#20815), which result in a
non-sensical dispatch arrangement, and contribute to a slow loading
experience do to the nonsense Unions that must be checked by subtyping.
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vtjnash committed Jul 12, 2023
1 parent 4995d3f commit 92ec9d4
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Showing 9 changed files with 20 additions and 52 deletions.
12 changes: 5 additions & 7 deletions base/abstractarray.jl
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Expand Up @@ -1984,16 +1984,14 @@ julia> cat(1, [2], [3;;]; dims=Val(2))

# The specializations for 1 and 2 inputs are important
# especially when running with --inline=no, see #11158
# The specializations for Union{AbstractVecOrMat,Number} are necessary
# to have more specialized methods here than in LinearAlgebra/uniformscaling.jl
vcat(A::AbstractArray) = cat(A; dims=Val(1))
vcat(A::AbstractArray, B::AbstractArray) = cat(A, B; dims=Val(1))
vcat(A::AbstractArray...) = cat(A...; dims=Val(1))
vcat(A::Union{AbstractVecOrMat,Number}...) = cat(A...; dims=Val(1))
vcat(A::Union{AbstractArray,Number}...) = cat(A...; dims=Val(1))
hcat(A::AbstractArray) = cat(A; dims=Val(2))
hcat(A::AbstractArray, B::AbstractArray) = cat(A, B; dims=Val(2))
hcat(A::AbstractArray...) = cat(A...; dims=Val(2))
hcat(A::Union{AbstractVecOrMat,Number}...) = cat(A...; dims=Val(2))
hcat(A::Union{AbstractArray,Number}...) = cat(A...; dims=Val(2))

typed_vcat(T::Type, A::AbstractArray) = _cat_t(Val(1), T, A)
typed_vcat(T::Type, A::AbstractArray, B::AbstractArray) = _cat_t(Val(1), T, A, B)
Expand Down Expand Up @@ -2055,8 +2053,8 @@ julia> hvcat((2,2,2), a,b,c,d,e,f) == hvcat(2, a,b,c,d,e,f)
true
```
"""
hvcat(rows::Tuple{Vararg{Int}}, xs::AbstractVecOrMat...) = typed_hvcat(promote_eltype(xs...), rows, xs...)
hvcat(rows::Tuple{Vararg{Int}}, xs::AbstractVecOrMat{T}...) where {T} = typed_hvcat(T, rows, xs...)
hvcat(rows::Tuple{Vararg{Int}}, xs::AbstractArray...) = typed_hvcat(promote_eltype(xs...), rows, xs...)
hvcat(rows::Tuple{Vararg{Int}}, xs::AbstractArray{T}...) where {T} = typed_hvcat(T, rows, xs...)

function typed_hvcat(::Type{T}, rows::Tuple{Vararg{Int}}, as::AbstractVecOrMat...) where T
nbr = length(rows) # number of block rows
Expand Down Expand Up @@ -2144,7 +2142,7 @@ end
hvcat(rows::Tuple{Vararg{Int}}, xs::Number...) = typed_hvcat(promote_typeof(xs...), rows, xs...)
hvcat(rows::Tuple{Vararg{Int}}, xs...) = typed_hvcat(promote_eltypeof(xs...), rows, xs...)
# the following method is needed to provide a more specific one compared to LinearAlgebra/uniformscaling.jl
hvcat(rows::Tuple{Vararg{Int}}, xs::Union{AbstractVecOrMat,Number}...) = typed_hvcat(promote_eltypeof(xs...), rows, xs...)
hvcat(rows::Tuple{Vararg{Int}}, xs::Union{AbstractArray,Number}...) = typed_hvcat(promote_eltypeof(xs...), rows, xs...)

function typed_hvcat(::Type{T}, rows::Tuple{Vararg{Int}}, xs::Number...) where T
nr = length(rows)
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12 changes: 0 additions & 12 deletions base/array.jl
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Expand Up @@ -2041,18 +2041,6 @@ function vcat(arrays::Vector{T}...) where T
end
vcat(A::Vector...) = cat(A...; dims=Val(1)) # more special than SparseArrays's vcat

# disambiguation with LinAlg/special.jl
# Union{Number,Vector,Matrix} is for LinearAlgebra._DenseConcatGroup
# VecOrMat{T} is for LinearAlgebra._TypedDenseConcatGroup
hcat(A::Union{Number,Vector,Matrix}...) = cat(A...; dims=Val(2))
hcat(A::VecOrMat{T}...) where {T} = typed_hcat(T, A...)
vcat(A::Union{Number,Vector,Matrix}...) = cat(A...; dims=Val(1))
vcat(A::VecOrMat{T}...) where {T} = typed_vcat(T, A...)
hvcat(rows::Tuple{Vararg{Int}}, xs::Union{Number,Vector,Matrix}...) =
typed_hvcat(promote_eltypeof(xs...), rows, xs...)
hvcat(rows::Tuple{Vararg{Int}}, xs::VecOrMat{T}...) where {T} =
typed_hvcat(T, rows, xs...)

_cat(n::Integer, x::Integer...) = reshape([x...], (ntuple(Returns(1), n-1)..., length(x)))

## find ##
Expand Down

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7f3a39f5b8420928993c4efb2d77626e
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1b020752a5681bc0c5de79f4ff2e80528f2899347b4b8b665fa339b191b4d2c71207cc80ddbba765dd8c049a9c99d589b5d917a6facda23eb7ef6c0213bf72af
26 changes: 5 additions & 21 deletions stdlib/LinearAlgebra/src/special.jl
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Expand Up @@ -330,27 +330,11 @@ end
==(A::Bidiagonal, B::SymTridiagonal) = iszero(_evview(B)) && iszero(A.ev) && A.dv == B.dv
==(B::SymTridiagonal, A::Bidiagonal) = A == B

# concatenation
const _SpecialArrays = Union{Diagonal, Bidiagonal, Tridiagonal, SymTridiagonal}
const _Symmetric_DenseArrays{T,A<:Matrix} = Symmetric{T,A}
const _Hermitian_DenseArrays{T,A<:Matrix} = Hermitian{T,A}
const _Triangular_DenseArrays{T,A<:Matrix} = UpperOrLowerTriangular{T,A}
const _Annotated_DenseArrays = Union{_SpecialArrays, _Triangular_DenseArrays, _Symmetric_DenseArrays, _Hermitian_DenseArrays}
const _Annotated_Typed_DenseArrays{T} = Union{_Triangular_DenseArrays{T}, _Symmetric_DenseArrays{T}, _Hermitian_DenseArrays{T}}
const _DenseConcatGroup = Union{Number, Vector, Adjoint{<:Any,<:Vector}, Transpose{<:Any,<:Vector}, Matrix, _Annotated_DenseArrays}
const _TypedDenseConcatGroup{T} = Union{Vector{T}, Adjoint{T,Vector{T}}, Transpose{T,Vector{T}}, Matrix{T}, _Annotated_Typed_DenseArrays{T}}

promote_to_array_type(::Tuple{Vararg{Union{_DenseConcatGroup,UniformScaling}}}) = Matrix

Base._cat(dims, xs::_DenseConcatGroup...) = Base._cat_t(dims, promote_eltype(xs...), xs...)
vcat(A::_DenseConcatGroup...) = Base.typed_vcat(promote_eltype(A...), A...)
hcat(A::_DenseConcatGroup...) = Base.typed_hcat(promote_eltype(A...), A...)
hvcat(rows::Tuple{Vararg{Int}}, xs::_DenseConcatGroup...) = Base.typed_hvcat(promote_eltype(xs...), rows, xs...)
# For performance, specially handle the case where the matrices/vectors have homogeneous eltype
Base._cat(dims, xs::_TypedDenseConcatGroup{T}...) where {T} = Base._cat_t(dims, T, xs...)
vcat(A::_TypedDenseConcatGroup{T}...) where {T} = Base.typed_vcat(T, A...)
hcat(A::_TypedDenseConcatGroup{T}...) where {T} = Base.typed_hcat(T, A...)
hvcat(rows::Tuple{Vararg{Int}}, xs::_TypedDenseConcatGroup{T}...) where {T} = Base.typed_hvcat(T, rows, xs...)
# TODO: remove these deprecations (used by SparseArrays in the past)
const _DenseConcatGroup = Union{}
const _SpecialArrays = Union{}

promote_to_array_type(::Tuple) = Matrix

# factorizations
function cholesky(S::RealHermSymComplexHerm{<:Real,<:SymTridiagonal}, ::NoPivot = NoPivot(); check::Bool = true)
Expand Down
14 changes: 6 additions & 8 deletions stdlib/LinearAlgebra/src/uniformscaling.jl
Original file line number Diff line number Diff line change
Expand Up @@ -408,7 +408,7 @@ end
# so that we can re-use this code for sparse-matrix hcat etcetera.
promote_to_arrays_(n::Int, ::Type, a::Number) = a
promote_to_arrays_(n::Int, ::Type{Matrix}, J::UniformScaling{T}) where {T} = Matrix(J, n, n)
promote_to_arrays_(n::Int, ::Type, A::AbstractVecOrMat) = A
promote_to_arrays_(n::Int, ::Type, A::AbstractArray) = A
promote_to_arrays(n,k, ::Type) = ()
promote_to_arrays(n,k, ::Type{T}, A) where {T} = (promote_to_arrays_(n[k], T, A),)
promote_to_arrays(n,k, ::Type{T}, A, B) where {T} =
Expand All @@ -417,17 +417,16 @@ promote_to_arrays(n,k, ::Type{T}, A, B, C) where {T} =
(promote_to_arrays_(n[k], T, A), promote_to_arrays_(n[k+1], T, B), promote_to_arrays_(n[k+2], T, C))
promote_to_arrays(n,k, ::Type{T}, A, B, Cs...) where {T} =
(promote_to_arrays_(n[k], T, A), promote_to_arrays_(n[k+1], T, B), promote_to_arrays(n,k+2, T, Cs...)...)
promote_to_array_type(A::Tuple{Vararg{Union{AbstractVecOrMat,UniformScaling,Number}}}) = Matrix

_us2number(A) = A
_us2number(J::UniformScaling) = J.λ

for (f, _f, dim, name) in ((:hcat, :_hcat, 1, "rows"), (:vcat, :_vcat, 2, "cols"))
@eval begin
@inline $f(A::Union{AbstractVecOrMat,UniformScaling}...) = $_f(A...)
@inline $f(A::Union{AbstractArray,UniformScaling}...) = $_f(A...)
# if there's a Number present, J::UniformScaling must be 1x1-dimensional
@inline $f(A::Union{AbstractVecOrMat,UniformScaling,Number}...) = $f(map(_us2number, A)...)
function $_f(A::Union{AbstractVecOrMat,UniformScaling,Number}...; array_type = promote_to_array_type(A))
@inline $f(A::Union{AbstractArray,UniformScaling,Number}...) = $f(map(_us2number, A)...)
function $_f(A::Union{AbstractArray,UniformScaling,Number}...; array_type = promote_to_array_type(A))
n = -1
for a in A
if !isa(a, UniformScaling)
Expand All @@ -445,9 +444,8 @@ for (f, _f, dim, name) in ((:hcat, :_hcat, 1, "rows"), (:vcat, :_vcat, 2, "cols"
end
end

hvcat(rows::Tuple{Vararg{Int}}, A::Union{AbstractVecOrMat,UniformScaling}...) = _hvcat(rows, A...)
hvcat(rows::Tuple{Vararg{Int}}, A::Union{AbstractVecOrMat,UniformScaling,Number}...) = _hvcat(rows, A...)
function _hvcat(rows::Tuple{Vararg{Int}}, A::Union{AbstractVecOrMat,UniformScaling,Number}...; array_type = promote_to_array_type(A))
hvcat(rows::Tuple{Vararg{Int}}, A::Union{AbstractArray,UniformScaling,Number}...) = _hvcat(rows, A...)
function _hvcat(rows::Tuple{Vararg{Int}}, A::Union{AbstractArray,UniformScaling,Number}...; array_type = promote_to_array_type(A))
require_one_based_indexing(A...)
nr = length(rows)
sum(rows) == length(A) || throw(ArgumentError("mismatch between row sizes and number of arguments"))
Expand Down
4 changes: 2 additions & 2 deletions stdlib/SparseArrays.version
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
SPARSEARRAYS_BRANCH = main
SPARSEARRAYS_SHA1 = 2c7f4d6d839e9a97027454a037bfa004c1eb34b0
SPARSEARRAYS_BRANCH = master
SPARSEARRAYS_SHA1 = 78b1321ddc107370252fcc11b992f5c8bbd8f62f
SPARSEARRAYS_GIT_URL := https://github.com/JuliaSparse/SparseArrays.jl.git
SPARSEARRAYS_TAR_URL = https://api.github.com/repos/JuliaSparse/SparseArrays.jl/tarball/$1

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