test offset calcs #646
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name: Build and Deploy Package | |
on: | |
push: | |
tags: | |
- '*' | |
branches: | |
- main | |
- dev | |
- lukasdev | |
jobs: | |
build: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: ['3.10', 3.9, 3.8] | |
steps: | |
- name: Checkout code | |
uses: actions/checkout@v2 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v2 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
python -m pip install --upgrade setuptools wheel | |
pip install -r requirements_dev.txt | |
- name: Build Package | |
run: | | |
python setup.py sdist bdist_wheel | |
- name: Install Samtools | |
run: | | |
sudo apt-get update | |
sudo apt-get install -y samtools | |
- name: Run tests | |
run: pytest | |
# - name: Python flake8 Lint | |
# uses: py-actions/[email protected] | |