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test offset calcs

test offset calcs #646

Workflow file for this run

name: Build and Deploy Package
on:
push:
tags:
- '*'
branches:
- main
- dev
- lukasdev
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ['3.10', 3.9, 3.8]
steps:
- name: Checkout code
uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
python -m pip install --upgrade setuptools wheel
pip install -r requirements_dev.txt
- name: Build Package
run: |
python setup.py sdist bdist_wheel
- name: Install Samtools
run: |
sudo apt-get update
sudo apt-get install -y samtools
- name: Run tests
run: pytest
# - name: Python flake8 Lint
# uses: py-actions/[email protected]