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Add ShortScience integration #6018

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merged 18 commits into from
Mar 6, 2020
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@stevensdavid stevensdavid commented Feb 25, 2020

This PR introduces a simple integration towards ShortScience as tracked by #6015. The integration is in the form of an additional context menu item called Search ShortScience which, if clicked, will open the user's web browser to the search results for the selected entry's title.

I experimented with generating a direct link to the ShortScience page for the article instead of linking to the search results, but the URI scheme is not entirely consistent nor predictable at ShortScience so it was deemed more effort than it was worth.

Example

There are a few things I'm uncertain about implementation-wise. I implemented this in what I believe is the same way as the other menu actions, which is through the use of the deprecated class OldCommandWrapper. I'm not sure if this is the best place to put the functionality, nor if the deprecated class is still the correct approach. I'm also still working on a testing strategy.

This commit adds a simple integration of ShortScience.org
in the form of an additional context menu action when an
entry is selected. This action opens the user's web browser
to the search page of ShortScience with the title of the
paper entered. Essentially, this is our MVP for the
integration towards ShortScience bar some testing.

[Issue: #3]
@stevensdavid stevensdavid changed the title Add ShortScience integration [WIP] Add ShortScience integration Feb 25, 2020
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calixtus commented Feb 25, 2020

Hi @stevensdavid , thank you for your work and your PR. You are right, BaseAction is deprecated and i already prepared a PR to completly remove the deprecated BaseAction stuff from the RightClickMenu.
The future way to implement menu actions is to put the action information in StandardActions and to implement the action as a class extending SimpleCommand. Should be very straight forward. For some hints, please have a look at my PR #5958. If you have questions, just ask me, i'm happy to help you.


@Override
public void action() {
final List<BibEntry> bes = mainTable.getSelectedEntries();
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Please implement a Fetcher (as the DOIFetcher or other fetchers do). --> Then, you can easily write test cases for the different shortscience urls etc.

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But this is not a fetcher, or I'm mistaken?

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This isn't really a fetcher as I've understood things, as it is essentially the same as a OpenURLAction with the exception that the link has to be generated. It doesn't fetch any information from the web, but instead opens the user's web browser.

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Hi @stevensdavid , thank you for your work and your PR. You are right, BaseAction is deprecated and i already prepared a PR to completly remove the deprecated BaseAction stuff from the RightClickMenu.
The future way to implement menu actions is to put the action information in StandardActions and to implement the action as a class extending SimpleCommand. Should be very straight forward. For some hints, please have a look at my PR #5958. If you have questions, just ask me, i'm happy to help you.

Hey @calixtus! It seems I need a few of the changes in API that you implemented in order to use the new style, making it difficult to port the feature to the new style before your PR is merged. Specifically, I'd need the new signature for RightClickMenu.create that you implemented in d1d74c7 as it includes the StateManager, and the ActionHelper methods you introduced in f664d10. These commits don't seem particularly easy to cherry-pick without getting your other refactoring work, and I'm not entirely sure if it is considered good practice to cherry-pick partial commits as I haven't done that before 😅

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Yes maybe it's better to wait until after the release of 5.0. It's better not to introduce new features right now, but to stabilize the current branch so we can release in some days and to put this feature into 5.1.

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koppor commented Feb 26, 2020

@stevensdavid You can base at @calixtus's branch if that works out.

Or just merge his branch into your branch.

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stevensdavid commented Feb 26, 2020

I ended up merging @calixtus's branch into this one, so the diff looks larger than it actually is. As such, this shouldn't be merged before #5958.

The code has been rewritten to use the new style, and I have broken out the link generation into a separate method which now has a few test cases.

Should the documentation and changelog be updated as part of this?

EDIT: Code style errors seem to be inherited from the merge, and are not from new changes.

@koppor koppor changed the base branch from master to replace_deprecated February 27, 2020 06:11
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koppor commented Feb 27, 2020

I changed the base branch to replace_deprecated to enable reviewing the diff to #5958.

Longer explanation: I mirrored the current state of #5958 into the branch replace_deprecated by locally cloning @calixtus's fork (git remote add calixtus ..., git fetch calixtus), checking out the branch and pushing it to here (origin).

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Went through the code. Some minor comments

* @param entry The entry to search for. Expects TITLE to be set for successful return.
* @return The URL if it was successfully created
*/
public static Optional<String> getShortScienceSearchURL(BibEntry entry) {
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This code should reside in the logic package somewhere - this is not user interaction, but some functionality. - it should also be tested in JUnit.

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Place it into org.jabref.logic.util (as new class). I did not find a petter place.

org.jabref.logic.importer could also fit, but not that well.

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I moved it to org.jabref.logic.util.ExternalLinkCreator.

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@koppor Thank you for the feedback! I've pushed new commits that should resolve your comments.

@stevensdavid stevensdavid marked this pull request as ready for review February 27, 2020 12:58
@stevensdavid stevensdavid changed the title [WIP] Add ShortScience integration Add ShortScience integration Feb 27, 2020
@koppor koppor added this to the v5.1 milestone Feb 28, 2020
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LGTM! Thanks!

We will wait with merging until 5.0 is released, which should be in a few days.

@koppor koppor merged commit 7fda4cc into JabRef:replace_deprecated Mar 6, 2020
tobiasdiez added a commit to ShikunXiong/jabref that referenced this pull request Mar 20, 2020
commit 497fcd7
Author: Linus Dietz <[email protected]>
Date:   Thu Mar 19 21:07:34 2020 +0100

    Move Springer key to environment (JabRef#6139)

commit 99183e1
Author: Christoph <[email protected]>
Date:   Wed Mar 18 20:28:36 2020 +0100

    Add APS Fetcher (refactored) (JabRef#6143)

    * Add APS fetcher

    * Fix case sensitivity bug

    * Refactor ApsFetcher

    * Add note about APS fetcher

    * Refactor findFulltext()

    * Refactor getId()

    * Parameterize ApsFetcherTest

    * Add link to APS changelog entry

    * Refactor APS Fetcher

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    Co-authored-by: August Janse <[email protected]>

commit edec608
Author: Siedlerchr <[email protected]>
Date:   Wed Mar 18 14:47:28 2020 +0100

    trigger build

commit cd051a1
Merge: 74408c0 a8abfcd
Author: github actions <[email protected]>
Date:   Tue Mar 17 18:08:19 2020 +0000

    Merge commit 'a8abfcd2b0d94120ad32097aec74923ab1cb857f'

commit a8abfcd
Author: github actions <[email protected]>
Date:   Tue Mar 17 18:08:19 2020 +0000

    Squashed 'src/main/resources/csl-styles/' changes from 268df9e..db8bd33

    db8bd33 Create journal-of-breast-cancer.csl (JabRef#4630)

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commit 74408c0
Author: Linus Dietz <[email protected]>
Date:   Tue Mar 17 09:42:32 2020 +0100

    Dependency updates (JabRef#6138)

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commit eace727
Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 17 08:42:41 2020 +0100

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commit 1b03f03
Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 17 06:46:07 2020 +0100

    Remove obsolete usage of File in DatabaseContext (JabRef#6135)

commit f4fe97b
Author: eetian <[email protected]>
Date:   Mon Mar 16 22:27:36 2020 -0700

    Fix warning display issue for entering a title made of two words (JabRef#6054)

commit 6468f42
Merge: 2339e95 57b5833
Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 17 06:23:57 2020 +0100

    Merge pull request JabRef#6128 from JabRef/fix-citeseer-test

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commit 2339e95
Author: Oliver Kopp <[email protected]>
Date:   Mon Mar 16 22:59:12 2020 +0100

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Author: Oliver Kopp <[email protected]>
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commit cbd26f1
Author: Carl Christian Snethlage <[email protected]>
Date:   Mon Mar 16 09:36:07 2020 +0100

    Small improvements in preferences dialog (JabRef#6130)

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commit 10f5468
Author: Oliver Kopp <[email protected]>
Date:   Mon Mar 16 09:00:04 2020 +0100

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commit c7e399c
Merge: 0628f11 f52bd03
Author: Oliver Kopp <[email protected]>
Date:   Mon Mar 16 07:45:59 2020 +0100

    Merge pull request JabRef#6117 from JabRef/refactor-save

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commit f52bd03
Author: Oliver Kopp <[email protected]>
Date:   Mon Mar 16 07:45:25 2020 +0100

    Fix title refresh

commit 57b5833
Author: Oliver Kopp <[email protected]>
Date:   Sun Mar 15 21:52:10 2020 +0100

    Fix fetcher test: CiteSeerTest

commit 0628f11
Merge: a71959f 0f93e22
Author: Oliver Kopp <[email protected]>
Date:   Sun Mar 15 20:38:31 2020 +0100

    Merge pull request JabRef#6126 from JabRef/google-captcha

    Minor fetcher improvements

commit 3f9922e
Author: Stefan Kolb <[email protected]>
Date:   Sun Mar 15 18:56:50 2020 +0100

    More refactorings

commit 0f93e22
Author: Stefan Kolb <[email protected]>
Date:   Sun Mar 15 18:15:44 2020 +0100

    Minor improvements for Google scholar fetcher

    Detect Google captcha div.
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commit 8f68de9
Author: Stefan Kolb <[email protected]>
Date:   Sun Mar 15 15:13:05 2020 +0100

    Improve arXiv fetcher

commit de790f9
Author: Stefan Kolb <[email protected]>
Date:   Sun Mar 15 15:06:04 2020 +0100

    Improve ACS fetcher

commit a71959f
Author: Stefan Kolb <[email protected]>
Date:   Sun Mar 15 15:01:32 2020 +0100

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commit 3eeb86c
Author: Stefan Kolb <[email protected]>
Date:   Sun Mar 15 15:00:17 2020 +0100

    Improve SpringerLink fetcher

commit 15c7981
Author: Stefan Kolb <[email protected]>
Date:   Sun Mar 15 14:52:42 2020 +0100

    Improve DoiResolution fetcher

commit 086629d
Author: Stefan Kolb <[email protected]>
Date:   Sun Mar 15 12:55:20 2020 +0100

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commit 0784b46
Merge: b5d5ed0 01de672
Author: github actions <[email protected]>
Date:   Sun Mar 15 02:09:40 2020 +0000

    Merge commit '01de672cc025432a6642f062a84e184d3a5408a1'

commit 01de672
Author: github actions <[email protected]>
Date:   Sun Mar 15 02:09:39 2020 +0000

    Squashed 'src/main/resources/csl-styles/' changes from 6d7ca0a..268df9e

    268df9e Create folia-biologica.csl (JabRef#4629)
    2480646 Update transversalites.csl (JabRef#4624)
    beae5fb Update instituto-de-pesquisas-energeticas-e-nucleares.csl (JabRef#4623)
    d7d70d2 Create australian-journal-of-agricultural-and-resource-economics.csl (JabRef#4626)
    cc2c6eb Update harvard-university-of-westminster.csl (JabRef#4622)
    30767b0 Create marine-turtle-newsletter.csl (JabRef#4625)
    a2324ac Create journal-of-new-zealand-grasslands.csl (JabRef#4628)
    1a87f4b Create china-national-standard-gb-t-7714-2015-author-date.csl (JabRef#4611)
    2032fef Create china-national-standard-gb-t-7714-2015-note.csl (JabRef#4610)
    3e00047 Create beilstein-open-access-journals.csl (JabRef#4613)
    b6c3363 Update american-institute-of-aeronautics-and-astronautics.csl (JabRef#4614)
    cc68a6c Remove et-al settings from american-chemical-society.csl (JabRef#4615)
    2393106 Create rivista-trimestrale-di-sanita-pubblica-veterinaria.csl (JabRef#4617)
    5f511cd Update transversalites.csl (JabRef#4621)
    f052033 Create aporia.csl (JabRef#4620)
    ae39d97 Create the-american-journal-of-geriatric-psychiatry.csl (JabRef#4619)
    d61f56c Update centre-de-recherche-sur-les-civilisations-de-l-asie-orientale.csl (JabRef#4612)
    9604285 Create united-nations-development-programme-icca-legal-review.csl (JabRef#4563)
    79c9235 Create jiaptr.csl (JabRef#4609)
    a044ab2 Update groupe-danthropologie-et-darcheologie-funeraire.csl (JabRef#4599)
    beab323 Create haemophilia.csl (JabRef#4601)

    git-subtree-dir: src/main/resources/csl-styles
    git-subtree-split: 268df9e

commit b5d5ed0
Merge: ce7bb89 c29db2e
Author: Carl Christian Snethlage <[email protected]>
Date:   Sat Mar 14 23:10:22 2020 +0100

    Merge pull request JabRef#6121 from JabRef/allow-icons-for-groups

    Icons from Material design icons not recognized

commit ce7bb89
Author: Siedlerchr <[email protected]>
Date:   Sat Mar 14 20:23:18 2020 +0100

    disable fail fast for the moment to let linux and windows build
    mac errors due to gradle dependecny fetching error

commit 571a051
Author: Stefan Kolb <[email protected]>
Date:   Sat Mar 14 20:14:53 2020 +0100

    Fulltext file deleted when being renamed to the name differing just by letter case (JabRef#6123)

    Fixes JabRef#6120

commit c29db2e
Author: Stefan Kolb <[email protected]>
Date:   Sat Mar 14 14:27:19 2020 +0100

    Icons from Material design icons not recognized

    Fixes JabRef#6078
    Related JabRef#5245

commit 8dd7444
Author: Siedlerchr <[email protected]>
Date:   Sat Mar 14 12:14:25 2020 +0100

    remove mavenLocal

commit d9929d8
Merge: 11d15cb 55171e6
Author: Siedlerchr <[email protected]>
Date:   Sat Mar 14 12:05:30 2020 +0100

    Merge remote-tracking branch 'upstream/master'

    * upstream/master:
      Update CHANGELOG.md
      Fix inconsistent capitalisation of downloaded files
      Improve arXiv fetcher (JabRef#6113)

commit 11d15cb
Author: Siedlerchr <[email protected]>
Date:   Sat Mar 14 12:04:51 2020 +0100

    activate cache on mac
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commit 55171e6
Merge: 209d336 a775858
Author: Stefan Kolb <[email protected]>
Date:   Sat Mar 14 12:02:31 2020 +0100

    Merge pull request JabRef#6119 from JabRef/lowercase-file-extension

    Lowercase file extension

commit a775858
Author: Stefan Kolb <[email protected]>
Date:   Sat Mar 14 11:26:27 2020 +0100

    Update CHANGELOG.md

commit 45e2c84
Author: Stefan Kolb <[email protected]>
Date:   Sat Mar 14 02:15:57 2020 +0100

    Fix inconsistent capitalisation of downloaded files

    Fixes JabRef#6115

commit b364396
Author: Oliver Kopp <[email protected]>
Date:   Sat Mar 14 01:15:05 2020 +0100

    Refactor SaveAction

    - Get rid of "doSave()"
    - Add notification for non-successful save in case of "SaveAll"
    - Remove deprecated "setDatabaseFile" (as we are Java8 with Path)

    Co-authored-by: Stefan Kolb <[email protected]>

commit 209d336
Author: Tobias Diez <[email protected]>
Date:   Fri Mar 13 23:22:31 2020 +0100

    Improve arXiv fetcher (JabRef#6113)

    No longer include the version string in the `eprint` field, as wished in https://discourse.jabref.org/t/remove-version-in-arxiv-import/1941. Also improved the arXiv identifier parser a bit.

    Co-authored-by: Christoph <[email protected]>

commit aab7a08
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 13 22:45:39 2020 +0100

    Add CHANGELOG.md for JabRef#6112

commit d954880
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 13 22:32:42 2020 +0100

    Try to disable code comments

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commit 8b7c374
Author: Stefan Kolb <[email protected]>
Date:   Fri Mar 13 22:17:31 2020 +0100

    fix: exception when opening already opened files (JabRef#6114)

commit 3c0c518
Merge: ae30bf0 45200d3
Author: Stefan Kolb <[email protected]>
Date:   Fri Mar 13 22:17:24 2020 +0100

    Merge pull request JabRef#6112 from JabRef/order-group-search

    ux: move group filter bar to top

commit 45200d3
Author: Stefan Kolb <[email protected]>
Date:   Fri Mar 13 22:02:34 2020 +0100

    Increase size of expand groups icon

commit fe76a94
Author: Stefan Kolb <[email protected]>
Date:   Fri Mar 13 20:54:54 2020 +0100

    ux: move group filter bar to top

    Switch search field and new group button
    Cleanups

    Co-authored-by: Oliver Kopp <[email protected]>

commit ae30bf0
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 13 19:44:59 2020 +0100

    Structure SUMMARY.md and add local build to jpackage.md

commit b02f982
Author: Stefan Kolb <[email protected]>
Date:   Fri Mar 13 19:31:05 2020 +0100

    Really create new lookup menu (JabRef#6111)

    Refs JabRef#5989
    Fixes koppor#404

commit 23034ce
Author: Tobias Diez <[email protected]>
Date:   Thu Mar 12 14:49:52 2020 +0100

    Delete CustomJFXPanel.java (JabRef#6106)

commit 49e4d41
Author: Tobias Diez <[email protected]>
Date:   Thu Mar 12 14:37:04 2020 +0100

    Remove gui globals (JabRef#6103)

    * Remove GUIGlobals

    * Deprecate Globals

    * Fix checkstyle

commit 43f533b
Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 10 11:03:51 2020 +0100

    Update gradle and git checkout (JabRef#6090)

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Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 10 09:06:48 2020 +0100

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Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 10 08:28:20 2020 +0100

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Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 10 08:26:48 2020 +0100

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Author: dependabot-preview[bot] <27856297+dependabot-preview[bot]@users.noreply.github.com>
Date:   Mon Mar 9 19:52:30 2020 +0100

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Date:   Mon Mar 9 19:51:48 2020 +0100

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commit 5fc2052
Author: Oliver Kopp <[email protected]>
Date:   Sun Mar 8 23:24:21 2020 +0100

    Add some grouping on example library

commit 93de138
Author: Oliver Kopp <[email protected]>
Date:   Sun Mar 8 22:55:23 2020 +0100

    Farewell Jörg - maybe you come back at some time

commit 37af676
Author: Oliver Kopp <[email protected]>
Date:   Sun Mar 8 22:29:10 2020 +0100

    Fix exception when creating a new library (JabRef#6080)

commit c874080
Author: Christoph <[email protected]>
Date:   Sat Mar 7 23:14:46 2020 +0100

    New Crowdin translations (JabRef#6075)

    * New translations JabRef_en.properties (Chinese Simplified)

    * New translations JabRef_en.properties (Dutch)

    * New translations JabRef_en.properties (French)

    * New translations JabRef_en.properties (German)

    * New translations JabRef_en.properties (Greek)

    * New translations JabRef_en.properties (Danish)

    * New translations JabRef_en.properties (Portuguese, Brazilian)

    * New translations JabRef_en.properties (Turkish)

    * New translations JabRef_en.properties (Tagalog)

    * New translations JabRef_en.properties (Swedish)

    * New translations JabRef_en.properties (Spanish)

    * New translations JabRef_en.properties (Russian)

    * New translations JabRef_en.properties (Persian)

    * New translations JabRef_en.properties (Portuguese)

    * New translations JabRef_en.properties (Polish)

    * New translations JabRef_en.properties (Norwegian)

    * New translations JabRef_en.properties (Japanese)

    * New translations JabRef_en.properties (Italian)

    * New translations JabRef_en.properties (Indonesian)

    * New translations JabRef_en.properties (Vietnamese)

commit 1a36304
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 23:21:45 2020 +0100

    Remove duplicated CHANGELOG.md line

commit 3d24714
Author: Carl Christian Snethlage <[email protected]>
Date:   Fri Mar 6 15:31:23 2020 +0100

    [WIP] Remove BaseAction from JabRefFrame (JabRef#6056)

    * Added UndoRedoAction

    * Refactored AppendDatabaseAction

    * Refactored ReplaceStringAction and GenerateBibtexKeyAction

    * Refactored CleanupAction

    * Added OpenEntryEditorAction, fixed bug about selected entries without open database

    * Refactored AbbreviateAction, merged UnabbreviateAction, removed unused Actions

    * Refactored DownloadFullTextAction

    * Added PullChangesFromSharedAction

    * Added SaveAction, removed remaining deprecated OldDatabaseCommandWrapper, BaseAction and Actions

    * Added UndoRedoAction

    * Refactored AppendDatabaseAction

    * Refactored ReplaceStringAction and GenerateBibtexKeyAction

    * Refactored CleanupAction

    * Added OpenEntryEditorAction, fixed bug about selected entries without open database

    * Refactored AbbreviateAction, merged UnabbreviateAction, removed unused Actions

    * Refactored DownloadFullTextAction

    * Added PullChangesFromSharedAction

    * Added SaveAction, removed remaining deprecated OldDatabaseCommandWrapper, BaseAction and Actions

    * Removed test, added default case for codacy compliance

    * Removed test for notifications

commit 8060338
Author: Christoph <[email protected]>
Date:   Fri Mar 6 14:35:25 2020 +0100

    New translations JabRef_en.properties (French) (JabRef#6071)

commit 55234f6
Author: JabRef <[email protected]>
Date:   Fri Mar 6 12:22:16 2020 +0000

    GitBook: [master] 23 pages modified

commit b6d6b79
Merge: d9a8088 17eb38b
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 11:18:20 2020 +0100

    Merge branch 'replace_deprecated'

commit d9a8088
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 10:58:32 2020 +0100

    Add month normalization to AstroPhysicsFetcher (JabRef#6022)

commit 9c0fa85
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 10:57:43 2020 +0100

    Code: Tex --> Latex (in the context of ParseLatex) (JabRef#6019)

commit 548d33c
Author: Stefan Kolb <[email protected]>
Date:   Fri Mar 6 10:57:22 2020 +0100

    Shutdown should be fixed since v2.1.2 (JabRef#5993)

commit 17eb38b
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 10:50:50 2020 +0100

    Fix CHANGELOG.md order

commit 11545e1
Merge: 7fda4cc ac295cb
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 10:50:15 2020 +0100

    Merge branch 'master' into replace_deprecated

commit 7fda4cc
Author: David Stevens <[email protected]>
Date:   Fri Mar 6 10:49:15 2020 +0100

    Add ShortScience integration (JabRef#6018)

commit ac295cb
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 10:33:38 2020 +0100

    Shorten CHANGELOG.md intro text

commit 3839110
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 10:32:51 2020 +0100

    Show development information

commit 2e6f433
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 06:57:35 2020 +0100

    Trigger build

commit 60ff83a
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 09:43:06 2020 +0100

    Fix -ci suffix removal

commit 289142f
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 09:02:47 2020 +0100

    Trigger build

commit a3d67cc
Author: Christoph <[email protected]>
Date:   Fri Mar 6 09:02:00 2020 +0100

    Fix exception when adding save action without selected formatter (JabRef#6072)

commit b28626b
Author: github actions <[email protected]>
Date:   Fri Mar 6 05:58:21 2020 +0000

    Squashed 'src/main/resources/csl-styles/' changes from 265a3a9..6d7ca0a

    6d7ca0a Update associacao-brasileira-de-normas-tecnicas-ufrgs.csl (JabRef#4598)
    6049caa Update geistes-und-kulturwissenschaften-heilmann.csl (JabRef#4597)
    9526038 journal title in italics in biophysical-journal.csl (JabRef#4595)
    9ab51f9 Create the-university-of-tokyo-law-review.csl (JabRef#4593)
    126f84c Always show DOI for article-journal for journal-of-forensic-sciences.csl (JabRef#4596)

    git-subtree-dir: src/main/resources/csl-styles
    git-subtree-split: 6d7ca0a

commit fdd8797
Merge: b81d248 b28626b
Author: github actions <[email protected]>
Date:   Fri Mar 6 05:58:21 2020 +0000

    Merge commit 'b28626b0a31006c25574f641fb4cb2b6c194d1cd'

commit b81d248
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 06:57:35 2020 +0100

    Trigger build

commit 35c3c95
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 06:13:38 2020 +0100

    Fix release date

commit 20e76a3
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 06:51:49 2020 +0100

    Explicitly list more external libraries

commit b676228
Author: Oliver Kopp <[email protected]>
Date:   Thu Mar 5 06:37:40 2020 +0100

    Ignore extracted JDK 14

commit 22173da
Author: Oliver Kopp <[email protected]>
Date:   Fri Mar 6 05:46:00 2020 +0100

    Revert "Update JDK14 from 34 to Build 36 (2020/2/6) - Release Candidate"

    This reverts commit fd08f8d.

commit 3ac6331
Author: Tobias Diez <[email protected]>
Date:   Thu Mar 5 11:00:26 2020 +0100

    Disable codecov comments

commit 84b1d5b
Author: Tobias Diez <[email protected]>
Date:   Thu Mar 5 10:51:05 2020 +0100

    Updated screenshot and added hint on the FAQ (JabRef#6058)

commit 819df76
Author: Tobias Diez <[email protected]>
Date:   Thu Mar 5 09:57:17 2020 +0100

    Readd package portable

commit a209399
Author: Tobias Diez <[email protected]>
Date:   Thu Mar 5 09:51:26 2020 +0100

    Add debug output

commit d8ef173
Merge: d27867f 4bdedcb
Author: Oliver Kopp <[email protected]>
Date:   Thu Mar 5 06:09:33 2020 +0100

    Merge branch 'master' of github.com:JabRef/jabref

commit d27867f
Author: Oliver Kopp <[email protected]>
Date:   Thu Mar 5 06:08:01 2020 +0100

    Move snap publishing to own workflow

commit 4bdedcb
Merge: 6a4fa61 dbd4865
Author: github actions <[email protected]>
Date:   Thu Mar 5 05:00:53 2020 +0000

    Merge commit 'dbd48659bba98c38d48b902641cfda93aa211a61'

commit dbd4865
Author: github actions <[email protected]>
Date:   Thu Mar 5 05:00:53 2020 +0000

    Squashed 'src/main/resources/csl-locales/' changes from 2b94bf9fac..d0ee4d13c9

    d0ee4d13c9 Update CONTRIBUTING.md

    git-subtree-dir: src/main/resources/csl-locales
    git-subtree-split: d0ee4d13c942648c2c88629aeb01f03a17fac72c

commit cd70746
Author: Oliver Kopp <[email protected]>
Date:   Wed Mar 4 22:52:48 2020 +0100

    Remove obsolete step

commit 1d6887e
Author: Oliver Kopp <[email protected]>
Date:   Wed Mar 4 22:35:33 2020 +0100

    Add debug output for snap file location

commit ecf822e
Author: Oliver Kopp <[email protected]>
Date:   Wed Mar 4 22:20:31 2020 +0100

    Try to build snapcraft image also on master-release

commit 29ed8fe
Merge: d8e4c11 1a7a4df
Author: Oliver Kopp <[email protected]>
Date:   Wed Mar 4 22:16:35 2020 +0100

    Merge remote-tracking branch 'origin/snapcraft-publish-action' into master-release

commit 1a7a4df
Author: Oliver Kopp <[email protected]>
Date:   Wed Mar 4 22:08:50 2020 +0100

    Build snap only for master branch

commit d8e4c11
Author: Oliver Kopp <[email protected]>
Date:   Wed Mar 4 17:40:22 2020 +0100

    Update GitVersion action from v0.3 to v0.9.1 (JabRef#6061)

commit 6a4fa61
Author: Oliver Kopp <[email protected]>
Date:   Wed Mar 4 17:44:23 2020 +0100

    Add empty line to deployment.yml to trigger build

commit 2a13674
Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 3 21:41:03 2020 +0100

    Release v5.0

commit 6a4df6f
Author: Oliver Kopp <[email protected]>
Date:   Wed Mar 4 21:07:57 2020 +0100

    Refine external-libraries.txt

commit 3d9eccc
Author: Oliver Kopp <[email protected]>
Date:   Wed Mar 4 20:53:48 2020 +0100

    Revert "Remove ci prefix for releases"

    This reverts commit 8660e29.

commit 2978dee
Author: Oliver Kopp <[email protected]>
Date:   Wed Mar 4 20:53:12 2020 +0100

    Remove suffix "-ci.1" from version information stored in BuildInfo

commit 8660e29
Author: Tobias Diez <[email protected]>
Date:   Wed Mar 4 20:06:15 2020 +0100

    Remove ci prefix for releases

commit 8fdfcfa
Author: Galileo Sartor <[email protected]>
Date:   Wed Mar 4 16:40:10 2020 +0100

    Use github action to publish snap

commit 21c6e5e
Author: Galileo Sartor <[email protected]>
Date:   Wed Mar 4 15:19:56 2020 +0100

    snap: fix for native-messaging-host permissions (JabRef#6062)

    * snap: fix for native-messaging-host permissions
    add hook for chrome/chromium

    * snap: fix no newline

    * Add snap browser integration to changelog

commit 8111707
Author: Oliver Kopp <[email protected]>
Date:   Wed Mar 4 01:13:45 2020 +0100

    Refine list of external libraries

commit fd08f8d
Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 3 23:05:00 2020 +0100

    Update JDK14 from 34 to Build 36 (2020/2/6) - Release Candidate

    Source: https://jdk.java.net/14/

commit 3f9a508
Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 3 21:46:57 2020 +0100

    Also release a binary in the "master-release" branch (which is to test releases)

commit e7d3f0b
Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 3 21:27:23 2020 +0100

    Refine CHANGELOG.md (markdown-lint)

commit ffef04a
Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 3 20:39:24 2020 +0100

    Add authors

commit 7f3c556
Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 3 20:41:30 2020 +0100

    Add authors of 5fa1dcf

commit eb521ad
Author: Christoph <[email protected]>
Date:   Tue Mar 3 23:10:38 2020 +0100

    New Crowdin translations (JabRef#6059)

commit d88df2b
Author: Oliver Kopp <[email protected]>
Date:   Tue Mar 3 23:00:58 2020 +0100

    Lint README.md

commit 01fdf59
Merge: adce9b9 ed0c6d8
Author: github actions <[email protected]>
Date:   Tue Mar 3 20:42:27 2020 +0000

    Merge commit 'ed0c6d8616adcd46491588910d63d86ef1f3dfdc'

commit ed0c6d8
Author: github actions <[email protected]>
Date:   Tue Mar 3 20:42:26 2020 +0000

    Squashed 'src/main/resources/csl-styles/' changes from 1ab0241..265a3a9

    265a3a9 Update john-benjamins-publishing-company-linguistik-aktuell-linguistics-today.csl (JabRef#4588)
    bfcd47c Update journal-of-forensic-sciences.csl (JabRef#4590)
    165be9c Create laboratory-animal-science-professional.csl (JabRef#4591)
    b51b8e6 Create pediatric-infectious-disease-journal.csl (JabRef#4589)

    git-subtree-dir: src/main/resources/csl-styles
    git-subtree-split: 265a3a9

commit adce9b9
Author: Jonas Lähnemann <[email protected]>
Date:   Tue Mar 3 21:16:01 2020 +0100

    JournalList: Minor corrections (JabRef#6043)

    * Corrections to Physics Status Solidi

    Wrong abbreviations were coming last and thus took precedence over the correct ones in the unabbreviator.

commit a03bad1
Author: github actions <[email protected]>
Date:   Tue Mar 3 14:42:15 2020 +0000

    Squashed 'src/main/resources/csl-styles/' changes from 566df87..1ab0241

    1ab0241 bibtex.csl - remove creator lables
    722ba77 AGLC: Remove short-title from bibliography

    git-subtree-dir: src/main/resources/csl-styles
    git-subtree-split: 1ab0241

commit 6731c43
Merge: f908883 a03bad1
Author: github actions <[email protected]>
Date:   Tue Mar 3 14:42:15 2020 +0000

    Merge commit 'a03bad1ac7bdae078bf49a072cc33f74e444e986'

commit c0abdce
Merge: 789799b f908883
Author: Carl Christian Snethlage <[email protected]>
Date:   Tue Mar 3 15:40:40 2020 +0100

    Merge remote-tracking branch 'upstream/master' into replace_deprecated

commit f908883
Author: Tobias Diez <[email protected]>
Date:   Mon Mar 2 22:20:39 2020 +0100

    Add use statement for mariadb.

    Fixes JabRef#5886.

commit e6e2da3
Author: dependabot-preview[bot] <27856297+dependabot-preview[bot]@users.noreply.github.com>
Date:   Mon Mar 2 13:18:55 2020 +0100

    Bump jsoup from 1.12.2 to 1.13.1 (JabRef#6052)

    Bumps [jsoup](https://github.com/jhy/jsoup) from 1.12.2 to 1.13.1.
    - [Release notes](https://github.com/jhy/jsoup/releases)
    - [Changelog](https://github.com/jhy/jsoup/blob/master/CHANGES)
    - [Commits](jhy/jsoup@1.12.2...jsoup-1.13.1)

    Signed-off-by: dependabot-preview[bot] <[email protected]>

commit d48182d
Author: dependabot-preview[bot] <27856297+dependabot-preview[bot]@users.noreply.github.com>
Date:   Mon Mar 2 13:18:15 2020 +0100

    Bump checkstyle from 8.29 to 8.30 (JabRef#6051)

    Bumps [checkstyle](https://github.com/checkstyle/checkstyle) from 8.29 to 8.30.
    - [Release notes](https://github.com/checkstyle/checkstyle/releases)
    - [Commits](checkstyle/checkstyle@checkstyle-8.29...checkstyle-8.30)

    Signed-off-by: dependabot-preview[bot] <[email protected]>

commit 0128932
Author: Oliver Kopp <[email protected]>
Date:   Sun Mar 1 22:06:53 2020 +0100

    Update year

commit 0d14227
Author: Christoph <[email protected]>
Date:   Sun Mar 1 21:34:43 2020 +0100

    Fix fetcher tests using correct month (JabRef#6050)

commit 7804dbb
Author: Christoph <[email protected]>
Date:   Sun Mar 1 21:17:00 2020 +0100

    New Crowdin translations (JabRef#6047)

commit ed5309b
Author: github actions <[email protected]>
Date:   Sun Mar 1 02:09:45 2020 +0000

    Squashed 'src/main/resources/csl-locales/' changes from d73af4a3fe..2b94bf9fac

    2b94bf9fac Fix markdown lint error "[no-literal-urls] Don’t use literal URLs without angle brackets" (JabRef#203)

    git-subtree-dir: src/main/resources/csl-locales
    git-subtree-split: 2b94bf9fac34a2f6b73f4d320144e5c0cb8a05bc

commit 4902c40
Merge: 8e26bd8 ed5309b
Author: github actions <[email protected]>
Date:   Sun Mar 1 02:09:45 2020 +0000

    Merge commit 'ed5309bc4dcdd904b82876f4bcc5e912b94770e5'

commit 6d8efb6
Author: github actions <[email protected]>
Date:   Sun Mar 1 02:09:42 2020 +0000

    Squashed 'src/main/resources/csl-styles/' changes from f03dece..566df87

    566df87 Create archeologicke-rozhledy.csl (JabRef#4586)
    4205586 Update mcgill-en.csl - include render-legislation macro (JabRef#4579)
    7d857f1 Create journal-of-plankton-research.csl (JabRef#4581)
    05c8aca Update mercator-institut-fur-sprachforderung-und-deutsch-als-zweitsprache.csl (JabRef#4582)
    564dc5f Update vodohospodarske-technicko-ekonomicke-informace.csl (JabRef#4584)

    git-subtree-dir: src/main/resources/csl-styles
    git-subtree-split: 566df87

commit 8e26bd8
Merge: be9c788 6d8efb6
Author: github actions <[email protected]>
Date:   Sun Mar 1 02:09:42 2020 +0000

    Merge commit '6d8efb6e8915b1fe16a9fa9c36b7953370395b44'

commit be9c788
Author: Oliver Kopp <[email protected]>
Date:   Sat Feb 29 09:39:25 2020 +0100

    Rephrase IntelliJ paragraph

commit 13c1ff6
Author: Oliver Kopp <[email protected]>
Date:   Sat Feb 29 09:35:30 2020 +0100

    Update gradle from 6.2 to 6.2.1 (JabRef#6048)

commit 789799b
Author: Carl Christian Snethlage <[email protected]>
Date:   Fri Feb 28 19:16:52 2020 +0100

    Fixed merge error

commit e4136b5
Merge: 88ca460 1ab300b
Author: Carl Christian Snethlage <[email protected]>
Date:   Fri Feb 28 18:26:51 2020 +0100

    Merge remote-tracking branch 'upstream/master' into replace_deprecated

commit 88ca460
Merge: 3c7da13 9424777
Author: Carl Christian Snethlage <[email protected]>
Date:   Fri Feb 28 11:48:05 2020 +0100

    Merge remote-tracking branch 'upstream/master' into replace_deprecated

    # Conflicts:
    #	src/main/java/org/jabref/gui/JabRefFrame.java

commit 3c7da13
Author: Carl Christian Snethlage <[email protected]>
Date:   Thu Feb 27 13:01:49 2020 +0100

    Fixed import order

commit 2719c92
Author: Carl Christian Snethlage <[email protected]>
Date:   Thu Feb 27 10:29:38 2020 +0100

    CodeCov and moved EditAction to edit package

commit da1b689
Merge: 16409e3 1d4efaa
Author: Carl Christian Snethlage <[email protected]>
Date:   Thu Feb 27 08:53:46 2020 +0100

    Merge remote-tracking branch 'upstream/master' into replace_deprecated

commit 16409e3
Author: Carl Christian Snethlage <[email protected]>
Date:   Sun Feb 23 17:41:28 2020 +0100

    l10n

commit dcdef68
Author: Carl Christian Snethlage <[email protected]>
Date:   Sun Feb 23 17:22:12 2020 +0100

    Extracted BaseAction out of EditAction

commit a800bf4
Author: Carl Christian Snethlage <[email protected]>
Date:   Sat Feb 22 19:42:47 2020 +0100

    Fixed possible NPE in SpecialFieldAction

commit a5bf6b7
Author: Carl Christian Snethlage <[email protected]>
Date:   Sat Feb 22 19:27:30 2020 +0100

    Extracted BaseAction out of SpecialFieldMenuItemFactory

commit c84be95
Merge: 9b8e385 d38f813
Author: Carl Christian Snethlage <[email protected]>
Date:   Sat Feb 22 15:29:48 2020 +0100

    Merge remote-tracking branch 'upstream/master' into replace_deprecated

    # Conflicts:
    #	src/main/java/org/jabref/gui/JabRefFrame.java

commit 9b8e385
Author: Carl Christian Snethlage <[email protected]>
Date:   Thu Feb 20 23:40:10 2020 +0100

    CHANGELOG.md

commit 08fa945
Author: Carl Christian Snethlage <[email protected]>
Date:   Thu Feb 20 14:18:37 2020 +0100

    Fixed l10n merge errors

commit 1dc67db
Merge: bca3a0b 5fa1dcf
Author: Carl Christian Snethlage <[email protected]>
Date:   Thu Feb 20 14:09:29 2020 +0100

    Merge remote-tracking branch 'upstream/master' into replace_deprecated

    # Conflicts:
    #	src/main/resources/l10n/JabRef_en.properties

commit bca3a0b
Author: Carl Christian Snethlage <[email protected]>
Date:   Thu Feb 20 14:08:32 2020 +0100

    Refactored ActionHelper, removed some deprecated Actions and minor corrections

commit f922be3
Merge: def0e67 c768697
Author: Carl Christian Snethlage <[email protected]>
Date:   Wed Feb 19 17:20:20 2020 +0100

    Merge remote-tracking branch 'upstream/master' into replace_deprecated

    # Conflicts:
    #	src/main/resources/l10n/JabRef_en.properties

commit def0e67
Author: Carl Christian Snethlage <[email protected]>
Date:   Wed Feb 19 17:11:58 2020 +0100

    l10n and some minor corrections

commit b83d547
Author: Carl Christian Snethlage <[email protected]>
Date:   Wed Feb 19 00:34:41 2020 +0100

    Refactored CopyBibTeXKeyAndLinkAction, copyTitle, copyCiteKey, copyKey, copyKeyAndTitle to CopyMoreActions

commit e1a6e78
Author: Carl Christian Snethlage <[email protected]>
Date:   Tue Feb 18 21:41:58 2020 +0100

    Refactored CitationStyleToClipboardWorkerTest to CopyCitationAction

commit 18a3439
Author: Carl Christian Snethlage <[email protected]>
Date:   Tue Feb 18 20:41:42 2020 +0100

    Refactored AttachFileAction

commit b71360b
Author: Carl Christian Snethlage <[email protected]>
Date:   Tue Feb 18 20:32:52 2020 +0100

    Refactored SendAsEMailAction

commit f664d10
Author: Carl Christian Snethlage <[email protected]>
Date:   Tue Feb 18 18:41:18 2020 +0100

    Added OpenUrlAction, Refactored MergeEntriesAction, MergeWitchFetchedEntryAction, AttachFileAction

commit d1d74c7
Author: Carl Christian Snethlage <[email protected]>
Date:   Mon Feb 17 23:14:23 2020 +0100

    OpenConsole, OpenFolder, OpenExternalFile

commit 0d2efc4
Author: Carl Christian Snethlage <[email protected]>
Date:   Mon Feb 17 20:45:10 2020 +0100

    Preview and XMPWriter
koppor pushed a commit that referenced this pull request Apr 15, 2022
9ff3112 Update bibtex.csl (#6021)
68ed5f7 Don't initialize with hyphen in Vancouver/NLM (#6022)
80206ad Update american-physics-society.csl (#5934)
cfbdba6 Update csl style (#6003)
546ee88 Update institut-francais-darcheologie-orientale-en.csl (#6018)
1153e3e Update institut-francais-darcheologie-orientale-etudes-arabes.csl (#6019)
42d5031 Update institut-francais-darcheologie-orientale-arab-studies.csl (#6020)
2e10c7a Update institut-francais-darcheologie-orientale.csl (#6015)
0c7d6a1 Create science-china-materials.csl (#6017)
0eb4bc7 Update frontiers.csl (#6014)
0fd9cc2 Update urad-rs-za-makroekonomske-analize-in-razvoj.csl (#5963)
1393837 Update harvard-university-of-the-west-of-england.csl (#6013)
4474b0e Update frontiers-of-biogeography.csl (#6010)
736c6df Render status field (for forthcoming, in press, etc.) to date groups (#6005)
51ff3dc Create journal-of-contemporary-water-research-and-education.csl (#5912)
7387ed3 cell.csl: Add a macro for DOI and webpage accessed date. (#5999)
21e2177 Create respiratory-care-journal.csl (#5998)
d0a2846 Update archaeonautica.csl (#5987)
664784e Update cardiff-university-harvard.csl (#5982)
07ce91e improve journal-of-avian-biology.csl (#5984)
349a5d6 update based on latest version of ISO 690 standard (#5976)
d8c3725 Update mary-ann-liebert-vancouver.csl (#5981)
7b2e70d Update style-manual-australian-government.csl (#5975)
bebf50c Create extracellular-vesicles-and-circulating-nucleic-acids.csl (#5979)
cabcdd4 Update united-states-international-trade-commission.csl (#5967)
948c48a Update cardiff-university-harvard.csl (#5977)
d6bf535 Add name to label gun
cf0d930 Test label gun
2f40fcd Update the-journal-of-egyptian-archaeology.csl (#5964)
aa023e1 Create materials-research-society-bulletin.csl (#5917)
ea31783 Changed quotation marks to Spanish ones (#5968)
27245f9 AJA: Add "." suffix to citation layout. (#5971)
7726a40 Update american-medical-association.csl (#5970)

git-subtree-dir: buildres/csl/csl-styles
git-subtree-split: 9ff3112
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5 participants