CRAN 0.9.5

* Get ready for CRAN

* Use tidy_model_parameters in ggcoefstats; clean up reexports

* Fix build failures

* Update ggcoefstats.Rmd

* Fix tests

* fix?

* Update test-ggcoefstats.R

* submission

* resubmission

.github/workflows/check-full.yaml

@@ -39,6 +39,8 @@ jobs:
       - uses: actions/checkout@v2
 
       - uses: r-lib/actions/setup-pandoc@v2
+        with:
+          pandoc-version: '2.19.2'
 
       - uses: r-lib/actions/setup-r@v2
         with:
@@ -48,7 +50,10 @@ jobs:
 
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
+          pak-version: devel
           extra-packages: any::rcmdcheck
           needs: check
 
       - uses: r-lib/actions/check-r-package@v2
+        with:
+          upload-snapshots: true

.github/workflows/lint.yaml

@@ -22,6 +22,7 @@ jobs:
 
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
+          pak-version: devel
           extra-packages: r-lib/lintr
           needs: lint
 

.github/workflows/pkgdown.yaml

@@ -24,14 +24,15 @@ jobs:
 
       - uses: r-lib/actions/setup-pandoc@v2
         with:
-            pandoc-version: '2.18'
+          pandoc-version: '2.19.2'
 
       - uses: r-lib/actions/setup-r@v2
         with:
           use-public-rspm: true
 
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
+          pak-version: devel
           extra-packages: r-lib/pkgdown, local::.
           needs: website
 

.github/workflows/render-readme.yml

@@ -22,13 +22,16 @@ jobs:
           fetch-depth: 0
 
       - uses: r-lib/actions/setup-pandoc@v2
+        with:
+          pandoc-version: '2.19.2'
 
       - uses: r-lib/actions/setup-r@v2
 
       - uses: r-lib/actions/setup-renv@v2
 
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
+          pak-version: devel
           extra-packages: |
             deps::.
             any::ggstatsplot

.github/workflows/test-coverage.yaml

@@ -23,6 +23,7 @@ jobs:
 
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
+          pak-version: devel
           extra-packages: r-lib/covr
           needs: coverage
 

API

@@ -6,7 +6,7 @@ combine_plots(plotlist, plotgrid.args = list(), annotation.args = list(), guides
 extract_stats(p, ...)
 ggbarstats(data, x, y, counts = NULL, type = "parametric", paired = FALSE, results.subtitle = TRUE, label = "percentage", label.args = list(alpha = 1, fill = "white"), k = 2L, proportion.test = results.subtitle, perc.k = 0L, bf.message = TRUE, ratio = NULL, conf.level = 0.95, sampling.plan = "indepMulti", fixed.margin = "rows", prior.concentration = 1, title = NULL, subtitle = NULL, caption = NULL, legend.title = NULL, xlab = NULL, ylab = NULL, ggtheme = ggstatsplot::theme_ggstatsplot(), package = "RColorBrewer", palette = "Dark2", ggplot.component = NULL, output = "plot", ...)
 ggbetweenstats(data, x, y, plot.type = "boxviolin", type = "parametric", pairwise.comparisons = TRUE, pairwise.display = "significant", p.adjust.method = "holm", effsize.type = "unbiased", bf.prior = 0.707, bf.message = TRUE, results.subtitle = TRUE, xlab = NULL, ylab = NULL, caption = NULL, title = NULL, subtitle = NULL, k = 2L, var.equal = FALSE, conf.level = 0.95, nboot = 100L, tr = 0.2, centrality.plotting = TRUE, centrality.type = type, centrality.point.args = list(size = 5, color = "darkred"), centrality.label.args = list(size = 3, nudge_x = 0.4, segment.linetype = 4, min.segment.length = 0), outlier.tagging = FALSE, outlier.label = NULL, outlier.coef = 1.5, outlier.shape = 19, outlier.color = "black", outlier.label.args = list(size = 3), point.args = list(position = ggplot2::position_jitterdodge(dodge.width = 0.6), alpha = 0.4, size = 3, stroke = 0), violin.args = list(width = 0.5, alpha = 0.2), ggsignif.args = list(textsize = 3, tip_length = 0.01), ggtheme = ggstatsplot::theme_ggstatsplot(), package = "RColorBrewer", palette = "Dark2", ggplot.component = NULL, output = "plot", ...)
-ggcoefstats(x, output = "plot", statistic = NULL, conf.int = TRUE, conf.level = 0.95, k = 2L, exclude.intercept = FALSE, effsize = "eta", meta.analytic.effect = FALSE, meta.type = "parametric", bf.message = TRUE, sort = "none", xlab = NULL, ylab = NULL, title = NULL, subtitle = NULL, caption = NULL, only.significant = FALSE, point.args = list(size = 3, color = "blue"), errorbar.args = list(height = 0), vline = TRUE, vline.args = list(size = 1, linetype = "dashed"), stats.labels = TRUE, stats.label.color = NULL, stats.label.args = list(size = 3, direction = "y", min.segment.length = 0), package = "RColorBrewer", palette = "Dark2", ggtheme = ggstatsplot::theme_ggstatsplot(), ...)
+ggcoefstats(x, output = "plot", statistic = NULL, conf.int = TRUE, conf.level = 0.95, k = 2L, exclude.intercept = FALSE, effectsize.type = "eta", meta.analytic.effect = FALSE, meta.type = "parametric", bf.message = TRUE, sort = "none", xlab = NULL, ylab = NULL, title = NULL, subtitle = NULL, caption = NULL, only.significant = FALSE, point.args = list(size = 3, color = "blue"), errorbar.args = list(height = 0), vline = TRUE, vline.args = list(size = 1, linetype = "dashed"), stats.labels = TRUE, stats.label.color = NULL, stats.label.args = list(size = 3, direction = "y", min.segment.length = 0), package = "RColorBrewer", palette = "Dark2", ggtheme = ggstatsplot::theme_ggstatsplot(), ...)
 ggcorrmat(data, cor.vars = NULL, cor.vars.names = NULL, output = "plot", matrix.type = "upper", type = "parametric", tr = 0.2, partial = FALSE, k = 2L, sig.level = 0.05, conf.level = 0.95, bf.prior = 0.707, p.adjust.method = "holm", pch = "cross", ggcorrplot.args = list(method = "square", outline.color = "black", pch.cex = 14), package = "RColorBrewer", palette = "Dark2", colors = c("#E69F00", "white", "#009E73"), ggtheme = ggstatsplot::theme_ggstatsplot(), ggplot.component = NULL, title = NULL, subtitle = NULL, caption = NULL, ...)
 ggdotplotstats(data, x, y, xlab = NULL, ylab = NULL, title = NULL, subtitle = NULL, caption = NULL, type = "parametric", test.value = 0, bf.prior = 0.707, bf.message = TRUE, effsize.type = "g", conf.level = 0.95, tr = 0.2, k = 2L, results.subtitle = TRUE, point.args = list(color = "black", size = 3, shape = 16), centrality.plotting = TRUE, centrality.type = type, centrality.line.args = list(color = "blue", size = 1, linetype = "dashed"), ggplot.component = NULL, ggtheme = ggstatsplot::theme_ggstatsplot(), output = "plot", ...)
 gghistostats(data, x, binwidth = NULL, xlab = NULL, title = NULL, subtitle = NULL, caption = NULL, type = "parametric", test.value = 0, bf.prior = 0.707, bf.message = TRUE, effsize.type = "g", conf.level = 0.95, tr = 0.2, k = 2L, ggtheme = ggstatsplot::theme_ggstatsplot(), results.subtitle = TRUE, bin.args = list(color = "black", fill = "grey50", alpha = 0.7), centrality.plotting = TRUE, centrality.type = type, centrality.line.args = list(color = "blue", size = 1, linetype = "dashed"), normal.curve = FALSE, normal.curve.args = list(size = 2), ggplot.component = NULL, output = "plot", ...)
@@ -22,19 +22,3 @@ grouped_ggpiestats(data, ..., grouping.var, output = "plot", plotgrid.args = lis
 grouped_ggscatterstats(data, ..., grouping.var, output = "plot", plotgrid.args = list(), annotation.args = list())
 grouped_ggwithinstats(data, ..., grouping.var, output = "plot", plotgrid.args = list(), annotation.args = list())
 theme_ggstatsplot()
-
-## Reexported objects
-
-rlang::!!
-rlang::!!!
-magrittr::%$%
-zeallot::%<-%
-magrittr::%<>%
-magrittr::%>%
-rlang::%|%
-rlang::%||%
-rlang:::=
-tibble::as_tibble
-rlang::exec
-statsExpressions::pairwise_comparisons
-tibble::tibble

CITATION.cff

@@ -1,5 +1,5 @@
 # -----------------------------------------------------------
-# CITATION file created with {cffr} R package, v0.2.3
+# CITATION file created with {cffr} R package, v0.3.0
 # See also: https://docs.ropensci.org/cffr/
 # -----------------------------------------------------------
 
@@ -8,7 +8,7 @@ message: 'To cite package "ggstatsplot" in publications use:'
 type: software
 license: GPL-3.0-only
 title: 'ggstatsplot: ''ggplot2'' Based Plots with Statistical Details'
-version: 0.9.4.9000
+version: 0.9.5
 doi: 10.21105/joss.03167
 abstract: 'Extension of ''ggplot2'', ''ggstatsplot'' creates graphics with details
   from statistical tests included in the plots themselves. It provides an easier syntax
@@ -17,7 +17,7 @@ abstract: 'Extension of ''ggplot2'', ''ggstatsplot'' creates graphics with detai
   (pie and bar charts) data. Currently, it supports the most common types of statistical
   approaches and tests: parametric, nonparametric, robust, and Bayesian versions of
   t-test/ANOVA, correlation analyses, contingency table analysis, meta-analysis, and
-  regression analyses.'
+  regression analyses. References: Patil (2021) <10.21105/joss.03236>.'
 authors:
 - family-names: Patil
   given-names: Indrajeet
@@ -106,9 +106,9 @@ references:
     given-names: Mattan S.
     email: [email protected]
     orcid: https://orcid.org/0000-0002-4287-4801
-  url: https://easystats.github.io/correlation/
-  version: '>= 0.8.2'
   year: '2022'
+  url: https://CRAN.R-project.org/package=correlation
+  version: '>= 0.8.3'
 - type: software
   title: datawizard
   abstract: 'datawizard: Easy Data Wrangling and Statistical Transformations'
@@ -139,7 +139,7 @@ references:
     email: [email protected]
     orcid: https://orcid.org/0000-0002-9271-5075
   url: https://easystats.github.io/datawizard/
-  version: '>= 0.5.0'
+  version: '>= 0.6.2'
   year: '2022'
 - type: software
   title: dplyr
@@ -268,8 +268,8 @@ references:
     email: [email protected]
     orcid: https://orcid.org/0000-0003-2042-7063
   year: '2022'
-  url: https://easystats.github.io/insight/
-  version: '>= 0.18.2'
+  url: https://CRAN.R-project.org/package=insight
+  version: '>= 0.18.5'
 - type: software
   title: paletteer
   abstract: 'paletteer: Comprehensive Collection of Color Palettes'
@@ -307,9 +307,9 @@ references:
     given-names: Brenton M.
     email: [email protected]
     orcid: https://orcid.org/0000-0001-9560-6336
-  year: '2022'
   url: https://easystats.github.io/parameters/
-  version: '>= 0.18.2'
+  version: '>= 0.19.0'
+  year: '2022'
 - type: software
   title: patchwork
   abstract: 'patchwork: The Composer of Plots'
@@ -352,7 +352,7 @@ references:
     orcid: https://orcid.org/0000-0001-9560-6336
   year: '2022'
   url: https://easystats.github.io/performance/
-  version: '>= 0.9.2'
+  version: '>= 0.10.0'
 - type: software
   title: purrr
   abstract: 'purrr: Functional Programming Tools'
@@ -400,8 +400,9 @@ references:
     given-names: Indrajeet
     email: [email protected]
     orcid: https://orcid.org/0000-0003-1995-6531
-  version: '>= 1.3.3'
   year: '2022'
+  url: https://CRAN.R-project.org/package=statsExpressions
+  version: '>= 1.3.4'
 - type: software
   title: tidyr
   abstract: 'tidyr: Tidy Messy Data'

DESCRIPTION

@@ -1,7 +1,7 @@
 Type: Package
 Package: ggstatsplot
 Title: 'ggplot2' Based Plots with Statistical Details
-Version: 0.9.4.9000
+Version: 0.9.5
 Authors@R: 
     c(person(given = "Indrajeet",
              family = "Patil",
@@ -23,29 +23,30 @@ Description: Extension of 'ggplot2', 'ggstatsplot' creates graphics with
     statistical approaches and tests: parametric, nonparametric, robust,
     and Bayesian versions of t-test/ANOVA, correlation analyses,
     contingency table analysis, meta-analysis, and regression analyses.
+    References: Patil (2021) <doi:10.21105/joss.03236>.
 License: GPL-3 | file LICENSE
 URL: https://indrajeetpatil.github.io/ggstatsplot/,
     https://github.com/IndrajeetPatil/ggstatsplot
 BugReports: https://github.com/IndrajeetPatil/ggstatsplot/issues
 Depends: 
     R (>= 4.0.0)
 Imports:
-    correlation (>= 0.8.2),
-    datawizard (>= 0.5.0),
+    correlation (>= 0.8.3),
+    datawizard (>= 0.6.2),
     dplyr,
     ggplot2,
     ggrepel,
     ggsignif,
     glue,
-    insight (>= 0.18.2),
+    insight (>= 0.18.5),
     paletteer,
-    parameters (>= 0.18.2),
+    parameters (>= 0.19.0),
     patchwork,
-    performance (>= 0.9.2),
+    performance (>= 0.10.0),
     purrr,
     rlang,
     stats,
-    statsExpressions (>= 1.3.3),
+    statsExpressions (>= 1.3.4),
     tidyr,
     utils
 Suggests:
@@ -74,8 +75,10 @@ VignetteBuilder:
 Encoding: UTF-8
 Language: en-US
 LazyData: true
-Roxygen: list(markdown = TRUE, roclets = c("rd", "namespace", "collate",
-    "pkgapi::api_roclet"))
+Roxygen: list(
+    markdown = TRUE, 
+    roclets = c("rd", "namespace", "collate", "pkgapi::api_roclet")
+  )
 RoxygenNote: 7.2.1
 Config/testthat/edition: 3
 Config/testthat/parallel: true

NAMESPACE

@@ -1,17 +1,7 @@
 # Generated by roxygen2: do not edit by hand
 
-export("!!!")
-export("!!")
-export("%$%")
-export("%<-%")
-export("%<>%")
 export("%>%")
-export("%|%")
-export("%||%")
-export(":=")
-export(as_tibble)
 export(combine_plots)
-export(exec)
 export(extract_stats)
 export(ggbarstats)
 export(ggbetweenstats)
@@ -32,7 +22,6 @@ export(grouped_ggscatterstats)
 export(grouped_ggwithinstats)
 export(pairwise_comparisons)
 export(theme_ggstatsplot)
-export(tibble)
 import(dplyr)
 import(ggplot2)
 import(rlang)
@@ -55,16 +44,6 @@ importFrom(patchwork,wrap_plots)
 importFrom(performance,check_outliers)
 importFrom(purrr,is_bare_numeric)
 importFrom(purrr,keep)
-importFrom(rlang,"!!!")
-importFrom(rlang,"!!")
-importFrom(rlang,"%|%")
-importFrom(rlang,"%||%")
-importFrom(rlang,":=")
-importFrom(rlang,exec)
 importFrom(statsExpressions,"%$%")
-importFrom(statsExpressions,"%<-%")
-importFrom(statsExpressions,"%<>%")
 importFrom(statsExpressions,"%>%")
-importFrom(statsExpressions,as_tibble)
 importFrom(statsExpressions,pairwise_comparisons)
-importFrom(statsExpressions,tibble)

NEWS.md

@@ -1,10 +1,23 @@
-# ggstatsplot 0.9.4
+# ggstatsplot 0.9.5
 
 N.B. All statistical analysis in `{ggstatsplot}` is carried out in
 `{statsExpressions}`. Thus, to see changes related to statistical expressions,
 read the `NEWS` for that package:
 <https://indrajeetpatil.github.io/statsExpressions/news/index.html>
 
+MAJOR CHANGES
+
+- Due to changes to the underlying API of `{parameters}`, the `effsize` argument 
+  has been renamed to `effectsize.type`.
+
+- Removes unnecessary re-exports of `{tidyverse}` operators.
+
+MINOR CHANGES
+
+- Fixes tests for changes in dependencies.
+
+# ggstatsplot 0.9.4
+
 - Internal housekeeping to adjust to changes in upstream dependencies.
 
 # ggstatsplot 0.9.3