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Update README.md
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tinavisnovska authored Feb 6, 2024
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6 changes: 3 additions & 3 deletions README.md
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Expand Up @@ -141,13 +141,13 @@ testRunID="191206_NB501498_0174_AHWCNMBGXC"
#### Locally

```
python3 generate_samplesheet.py \
python3 samplesheet_generator.py \
--run-id ${testRunID} \
--index-type simple \
--index-length 8 \
--investigator-name "name_(inpred_node)" \
--experiment-name "OUS pathology test run" \
--input-info-file test/infoFile.tsv \
--input-info-file /opt/test/infoFile.tsv \
--read-length-1 101 \
--read-length-2 101 \
--adapter-read-1 "AGATCGGAAGAGCACACGTCTGAACTCCAGTCA" \
Expand All @@ -166,4 +166,4 @@ TODO

#### Singularity/Apptainer

TODO
TODO

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