IQSS · landreev · Jun 27, 2024 · Apr 15, 2024 · Apr 15, 2024 · Apr 15, 2024
diff --git a/doc/release-notes/10494-payara-upgrade.md b/doc/release-notes/10494-payara-upgrade.md
@@ -0,0 +1,6 @@
+# Upgrade Payara to v6.2024.4
+
+With this version of Dataverse, we encourage you to upgrade to version 6.2024.4.
+This will address security issues accumulated since the release of 6.2023.8, which was required since Dataverse release 6.0.
+
+If you are using GDCC containers, this upgrade is included when pulling new release images.
diff --git a/doc/sphinx-guides/source/admin/monitoring.rst b/doc/sphinx-guides/source/admin/monitoring.rst
@@ -154,7 +154,7 @@ Tips:
 MicroProfile Metrics endpoint
 -----------------------------
 
-Payara provides the metrics endpoint: <https://docs.payara.fish/community/docs/6.2023.9/Technical%20Documentation/MicroProfile/Metrics/Metrics%20Rest%20Endpoint.html>_
+Payara provides the metrics endpoint: <https://docs.payara.fish/community/docs/Technical%20Documentation/MicroProfile/Metrics/Metrics%20Rest%20Endpoint.html>_
 The metrics you can retrieve that way:
 - `index_permit_wait_time_seconds_mean` displays how long does it take to receive a permit to index a dataset.
 - `index_time_seconds` displays how long does it take to index a dataset.
diff --git a/doc/sphinx-guides/source/developers/classic-dev-env.rst b/doc/sphinx-guides/source/developers/classic-dev-env.rst
@@ -93,15 +93,15 @@ On Linux, install ``jq`` from your package manager or download a binary from htt
 Install Payara
 ~~~~~~~~~~~~~~
 
-Payara 6.2023.8 or higher is required.
+Payara 6.2024.4 or higher is required.
 
 To install Payara, run the following commands:
 
 ``cd /usr/local``
 
-``sudo curl -O -L https://nexus.payara.fish/repository/payara-community/fish/payara/distributions/payara/6.2023.8/payara-6.2023.8.zip``
+``sudo curl -O -L https://nexus.payara.fish/repository/payara-community/fish/payara/distributions/payara/6.2024.4/payara-6.2024.4.zip``
 
-``sudo unzip payara-6.2023.8.zip``
+``sudo unzip payara-6.2024.4.zip``
 
 ``sudo chown -R $USER /usr/local/payara6``
 

diff --git a/doc/sphinx-guides/source/installation/prerequisites.rst b/doc/sphinx-guides/source/installation/prerequisites.rst
@@ -44,7 +44,7 @@ On RHEL/derivative you can make Java 17 the default with the ``alternatives`` co
 Payara
 ------
 
-Payara 6.2023.8 is recommended. Newer versions might work fine. Regular updates are recommended.
+Payara 6.2024.4 is recommended. Newer versions might work fine. Regular updates are recommended.
 
 Installing Payara
 =================
@@ -55,8 +55,8 @@ Installing Payara
 
 - Download and install Payara (installed in ``/usr/local/payara6`` in the example commands below)::
 
-	# wget https://nexus.payara.fish/repository/payara-community/fish/payara/distributions/payara/6.2023.8/payara-6.2023.8.zip
-	# unzip payara-6.2023.8.zip
+	# wget https://nexus.payara.fish/repository/payara-community/fish/payara/distributions/payara/6.2024.4/payara-6.2024.4.zip
+	# unzip payara-6.2024.4.zip
 	# mv payara6 /usr/local
 
 If nexus.payara.fish is ever down for maintenance, Payara distributions are also available from https://repo1.maven.org/maven2/fish/payara/distributions/payara/

diff --git a/doc/sphinx-guides/source/qa/test-automation.md b/doc/sphinx-guides/source/qa/test-automation.md
@@ -52,7 +52,7 @@ Go to the end of the log and then scroll up, looking for the failure. A failed A
 
 ```
 TASK [dataverse : download payara zip] *****************************************
-fatal: [localhost]: FAILED! => {"changed": false, "dest": "/tmp/payara.zip", "elapsed": 10, "msg": "Request failed: <urlopen error timed out>", "url": "https://nexus.payara.fish/repository/payara-community/fish/payara/distributions/payara/6.2023.8/payara-6.2023.8.zip"}
+fatal: [localhost]: FAILED! => {"changed": false, "dest": "/tmp/payara.zip", "elapsed": 10, "msg": "Request failed: <urlopen error timed out>", "url": "https://nexus.payara.fish/repository/payara-community/fish/payara/distributions/payara/6.2024.4/payara-6.2024.4.zip"}
 ```
 
 In the example above, if Payara can't be downloaded, we're obviously going to have problems deploying Dataverse to it!

diff --git a/modules/container-base/src/main/docker/Dockerfile b/modules/container-base/src/main/docker/Dockerfile
@@ -166,8 +166,6 @@ RUN <<EOF
     ${ASADMIN} create-jvm-options '-XX\:MetaspaceSize=${ENV=MEM_METASPACE_SIZE}'
     ${ASADMIN} create-jvm-options '-XX\:MaxMetaspaceSize=${ENV=MEM_MAX_METASPACE_SIZE}'
     ${ASADMIN} create-jvm-options '-XX\:+IgnoreUnrecognizedVMOptions'
-    # Workaround for FISH-7722: Failed to deploy war with @Stateless https://github.com/payara/Payara/issues/6337
-    ${ASADMIN} create-jvm-options --add-opens=java.base/java.io=ALL-UNNAMED
     # Disable autodeploy and hot reload
     ${ASADMIN} set configs.config.server-config.admin-service.das-config.dynamic-reload-enabled="false"
     ${ASADMIN} set configs.config.server-config.admin-service.das-config.autodeploy-enabled="false"

diff --git a/modules/dataverse-parent/pom.xml b/modules/dataverse-parent/pom.xml
@@ -148,7 +148,7 @@
         <argLine>-Duser.timezone=${project.timezone} -Dfile.encoding=${project.build.sourceEncoding} -Duser.language=${project.language} -Duser.region=${project.region}</argLine>
 
         <!-- Major system components and dependencies -->
-        <payara.version>6.2023.8</payara.version>
+        <payara.version>6.2024.4</payara.version>
         <postgresql.version>42.7.2</postgresql.version>
         <solr.version>9.3.0</solr.version>
         <aws.version>1.12.290</aws.version>
@@ -386,18 +386,6 @@
                 <enabled>false</enabled>
             </snapshots>
         </repository>
-        <!-- This repository is about to being phased out. See https://github.com/payara/Payara_PatchedProjects/issues/366 -->
-        <repository>
-            <id>payara-patched-externals</id>
-            <name>Payara Patched Externals</name>
-            <url>https://raw.github.com/payara/Payara_PatchedProjects/master</url>
-            <releases>
-                <enabled>true</enabled>
-            </releases>
-            <snapshots>
-                <enabled>false</enabled>
-            </snapshots>
-        </repository>
         <repository>
             <id>central-repo</id>
             <name>Central Repository</name>

diff --git a/pom.xml b/pom.xml
@@ -213,9 +213,6 @@
             <groupId>fish.payara.api</groupId>
             <artifactId>payara-api</artifactId>
             <scope>provided</scope>
-            <!-- Note: The version was provided by Payara BOM till 6.2023.7, when they removed the Core BOM from it as
-                       meant for internal use only. Simply referencing the version property here solves the problem. -->
-            <version>${payara.version}</version>
         </dependency>
 
         <!-- JSON-P -->

diff --git a/scripts/installer/as-setup.sh b/scripts/installer/as-setup.sh
@@ -117,9 +117,6 @@ function preliminary_setup()
 
   ./asadmin $ASADMIN_OPTS create-jvm-options "-Ddataverse.timerServer=true"
 
-  # Workaround for FISH-7722: Failed to deploy war with @Stateless https://github.com/payara/Payara/issues/6337
-  ./asadmin $ASADMIN_OPTS create-jvm-options --add-opens=java.base/java.io=ALL-UNNAMED
-
   # enable comet support
   ./asadmin $ASADMIN_OPTS set server-config.network-config.protocols.protocol.http-listener-1.http.comet-support-enabled="true"