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WorkflowError("For PEP support, please install peppy.") when running workflow #325

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lenakinzel opened this issue Nov 10, 2021 · 5 comments
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WorkflowError("For PEP support, please install peppy.") when running workflow #325

lenakinzel opened this issue Nov 10, 2021 · 5 comments
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@lenakinzel
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Problem occurs with python version 3.10.0 -> manually downgrading to python version 3.9.7 fixes the problem for now
@thomasbtf
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The following PR should fix this issue. conda-forge/peppy-feedstock#8

@nsheff
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nsheff commented Nov 16, 2021

This will also be fixed with peppy version 0.32.0, which will be released soon.

@thomasbtf
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Conda-forge implemented a patch, over at conda-forge/peppy-feedstock#9.
This patch is live since yesterday (see https://anaconda.org/conda-forge/peppy).

@lenakinzel Could you please try out the deployment method described in the snakemake workflow catalogue again and see, if its works now? :)

@thomasbtf
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thomasbtf commented Nov 23, 2021 •
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Needed another patch: conda-forge/peppy-feedstock#10

@thomasbtf thomasbtf added the bug Something isn't working label Dec 2, 2021
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Now it should be resolved, it was apparently a bug in snakemake.

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@nsheff @thomasbtf @lenakinzel