fix: generate high quality report .csv file (#433)

IKIM-Essen · Jan 3, 2022 · 077b80d · 077b80d
1 parent f883ce2
commit 077b80d
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/workflow/scripts/generate-high-quality-report.py b/workflow/scripts/generate-high-quality-report.py
@@ -57,7 +57,8 @@
     )
 
     # Only include samples with include flag
-    csv_table = csv_table[csv_table["include"] == "1"]
+    csv_table["include"] = csv_table["include"].astype(int)
+    csv_table = csv_table[csv_table["include"] == 1]
     csv_table.drop(columns=["include"], inplace=True)
 
     # Final touches