fix: move primer file location under workflow; this avoids file not being found in shared filesystems #2806
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johanneskoestermain.yml
on: pull_request
Linting
34s
Cancel-previous-jobs
2s
Formatting
1m 46s
Matrix: Benchmarks-Tests
Matrix: Technology-Tests
Annotations
14 errors and 6 warnings
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Technology-Tests (all, ion, shotgun)
The job was canceled because "all_ont_shotgun" failed.
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Technology-Tests (all, ion, shotgun)
The operation was canceled.
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Technology-Tests (all, ont, amplicon)
The job was canceled because "all_ont_shotgun" failed.
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Technology-Tests (all, ont, amplicon)
The operation was canceled.
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Technology-Tests (all, illumina, shotgun)
The job was canceled because "all_ont_shotgun" failed.
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Technology-Tests (all, illumina, shotgun)
The operation was canceled.
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Technology-Tests (all, illumina, amplicon)
The job was canceled because "all_ont_shotgun" failed.
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Technology-Tests (all, illumina, amplicon)
The operation was canceled.
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Technology-Tests (all, ion, amplicon)
The job was canceled because "all_ont_shotgun" failed.
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Technology-Tests (all, ion, amplicon)
The operation was canceled.
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Technology-Tests (all, all, shotgun)
The job was canceled because "all_ont_shotgun" failed.
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Technology-Tests (all, all, shotgun)
The operation was canceled.
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Technology-Tests (all, all, amplicon)
The job was canceled because "all_ont_shotgun" failed.
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Technology-Tests (all, all, amplicon)
The operation was canceled.
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Cancel-previous-jobs
The following actions uses node12 which is deprecated and will be forced to run on node16: khan/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Cancel-previous-jobs
The following actions use a deprecated Node.js version and will be forced to run on node20: khan/[email protected]. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Technology-Tests (all -np, all, amplicon)
No files were found with the provided path: .tests/results/patient-reports/2022-01-01.zip. No artifacts will be uploaded.
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Technology-Tests (all -np, all, amplicon)
No files were found with the provided path: .tests/logs/. No artifacts will be uploaded.
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Technology-Tests (all -np, all, shotgun)
No files were found with the provided path: .tests/logs/. No artifacts will be uploaded.
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Technology-Tests (all -np, all, shotgun)
No files were found with the provided path: .tests/results/patient-reports/2022-01-01.zip. No artifacts will be uploaded.
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Artifacts
Produced during runtime
| Name | Size | |
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log-rule-benchmark_assembly
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125 KB |
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log-rule-benchmark_mixtures
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49.9 KB |
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log-rule-benchmark_non_sars_cov_2
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89.9 KB |
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log-rule-benchmark_reads
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392 KB |
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log-rule-benchmark_strain_calling
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20.1 KB |
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log-rule-compare_assemblers
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72.9 KB |
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