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Update README.md
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josefawelling authored Feb 7, 2024
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A[/Illumina paired end reads/]
B["<b>Trimming and Filtering</b> <br> <i>fastp<i>"]
C["<b>Quality control</b> <br> <i>fastQC<i>"]
B["Trimming and Filtering <br> fastp"]
C["Quality control <br> fastQC"]
D[/MultiQC report/]
E["<b>Taxonomy Assignment</b> <br> <i>Kraken 2<i>"]
F["<b>Abundance Analysis</b> <br> <i>Bracken<i>"]
G["<b>Mapping against human genome</b> <br> <i>minimap2</i>"]
E["Taxonomy Assignment <br> Kraken 2"]
F["Abundance Analysis <br> Bracken"]
G["Mapping against human genome <br> minimap2"]
H[/Snakemake report/]
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