Merge pull request #5 from will-moore/ignore_chunks

Ignore chunks
IDR · Aug 28, 2023 · 4c1e32b · 4c1e32b
2 parents 6ec1b13 + bae1ed1
commit 4c1e32b
Showing 1 changed file with 6 additions and 2 deletions.
diff --git a/src/omero_mkngff/__init__.py b/src/omero_mkngff/__init__.py
@@ -244,8 +244,12 @@ def walk(self, path: Path) -> Generator[Tuple[Path, str, str], None, None]:
             if not p.is_dir():
                 yield (p.parent, p.name, "application/octet-stream")
             else:
-                yield (p.parent, p.name, "Directory")
-                yield from self.walk(p)
+                if (p / ".zarray").exists() or (p / ".zgroup").exists():
+                    yield (p.parent, p.name, "Directory")
+                    yield from self.walk(p)
+                else:
+                    # Chunk directory
+                    continue
 
     def get_uuid(self, args: Namespace) -> str:
         from omero.grid import ManagedRepositoryPrx as MRepo