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| # Installer Generation Guide | ||
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| To generate the installer for R-Instat with R bundled inside and all the R packages pre-installed requires a few steps. | ||
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| ## Step 1: Build R-Instat from Visual Studio | ||
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| You will have to repeat this step for generating 32 bit and 64 bit binaries. | ||
| - In Visual Studio open the R-Instat solution. | ||
| - To the left of the Start button are two dropdowns. | ||
| - Select Release for the first dropdown | ||
| - Select x86 for 32 bit build, and x64 for 64 bit build. | ||
| - Check that clsRLink.vb is pointing to the version of R you plan to bundle | ||
| ``` | ||
| Private strRBundledVersion As String = "3.6.2" | ||
| ``` | ||
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| ## Step 2: Generate Bundled R Install | ||
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| Once you have built release binaries of R-Instat: | ||
| 1. Open cmd.exe as an Administrator | ||
| 2. cd to the the bin folder with the Release binaries. It will probably look similar to C:/Users/YourName/source/repos/R-Instat/instat/bin/Release | ||
| or for 64 bit /R-Instat/instat/bin/x64/Release | ||
| 3. Then cd into the static folder (e.g R-Instat/instat/bin/Release/static) | ||
| 4. Download the R installer EXE from (https://cran.r-project.org/bin/windows/base/R-3.6.2-win.exe) and save into this directory | ||
| 5. Run the installer using | ||
| ``` | ||
| R-3.6.2-win.exe /DIR="./R-3.6.2" | ||
| ``` | ||
| 6. Go through the install process. Choose custom install and deselect either 32 bit or 64 bit. (If you're building for 32 bit then exclude 64 bit). | ||
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| ## Step 3: Install R packages inside bundled R | ||
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| 1. Cd into the R folder you just installed ./R-3.6.2/bin | ||
| 2. Run R.exe | ||
| 3. Run the install_bundled_packages.R script in the same folder as this Readme. | ||
| 4. The ncdf4.helpers package required a custom version, you can download it from here: https://drive.google.com/file/d/1UqwqVDxMvlHNocUa0i6uiGFT24zwGdgB/view?usp=sharing | ||
| Once you've downloaded that zip file, extract the ncdf4.helpers folder into the ./R-3.6.2/library folder | ||
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| ## Step 4: Build Installer EXE using Inno Setup | ||
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| 1. Install Inno Setup from here: https://www.jrsoftware.org/isdl.php | ||
| 2. Scroll down and select innosetup-6.0.3.exe (or a newer version) | ||
| 3. Open the Inno Script Compiler from the start menu | ||
| 4. From the file menu choose open | ||
| 5. Then navigate to the inno_install_script_32bit.iss script (or 64 bit version) in the same folder as this readme. | ||
| 6. From the top menu choose compile. | ||
| 7. The installer should be in installer/Output folder | ||
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| ## Bundling a newer version of R | ||
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| If you want to bundle a newer version of R (after discussing with the team the consequences of that) you'll need to change the following files: | ||
| - clsRLink.vb | ||
| - inno_install_script_32bit.iss | ||
| - inno_install_script_36bit.iss | ||
| - Installer_Generation_Guide.md |
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| ; Script generated by the Inno Script Studio Wizard. | ||
| ; SEE THE DOCUMENTATION FOR DETAILS ON CREATING INNO SETUP SCRIPT FILES! | ||
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| [Setup] | ||
| ; NOTE: The value of AppId uniquely identifies this application. | ||
| ; Do not use the same AppId value in installers for other applications. | ||
| ; (To generate a new GUID, click Tools | Generate GUID inside the IDE.) | ||
| AppId={{4263A8D4-1068-45F9-A542-C340C4A22E8B} | ||
| AppName=R-Instat | ||
| #define AppVerName "0.56" | ||
| AppVersion={#AppVerName} | ||
| AppPublisher=African Maths Institute | ||
| AppPublisherURL=http://r-instat.org/ | ||
| AppSupportURL=http://r-instat.org/ | ||
| AppUpdatesURL=http://r-instat.org/ | ||
| DefaultDirName={autopf}\R-Instat\{#AppVerName} | ||
| DefaultGroupName=R-Instat | ||
| AllowNoIcons=yes | ||
| OutputBaseFilename=R-Instat_{#AppVerName}_Installer_32 | ||
| SetupIconFile=..\instat\Resources\rinstat_icon_Hih_icon.ico | ||
| Compression=lzma | ||
| SolidCompression=yes | ||
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| [Tasks] | ||
| Name: "desktopicon"; Description: "{cm:CreateDesktopIcon}"; GroupDescription: "{cm:AdditionalIcons}"; Flags: unchecked | ||
| Name: "quicklaunchicon"; Description: "{cm:CreateQuickLaunchIcon}"; GroupDescription: "{cm:AdditionalIcons}"; Flags: unchecked; OnlyBelowVersion: 0,6.1 | ||
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| [Files] | ||
| Source: "..\instat\bin\Release\instat.exe"; DestDir: "{app}"; Flags: ignoreversion | ||
| Source: "..\instat\bin\Release\*"; DestDir: "{app}"; Flags: ignoreversion recursesubdirs createallsubdirs | ||
| ; NOTE: Don't use "Flags: ignoreversion" on any shared system files | ||
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| [Icons] | ||
| Name: "{group}\R-Instat"; Filename: "{app}\instat.exe" | ||
| Name: "{group}\{cm:UninstallProgram,R-Instat}"; Filename: "{uninstallexe}" | ||
| Name: "{commondesktop}\R-Instat"; Filename: "{app}\instat.exe"; Tasks: desktopicon | ||
| Name: "{userappdata}\Microsoft\Internet Explorer\Quick Launch\R-Instat"; Filename: "{app}\instat.exe"; Tasks: quicklaunchicon | ||
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| [Run] | ||
| Filename: "{app}\instat.exe"; Description: "{cm:LaunchProgram,R-Instat}"; Flags: nowait postinstall skipifsilent |
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| Original file line number | Diff line number | Diff line change |
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| ; Script generated by the Inno Script Studio Wizard. | ||
| ; SEE THE DOCUMENTATION FOR DETAILS ON CREATING INNO SETUP SCRIPT FILES! | ||
|
|
||
| [Setup] | ||
| ; NOTE: The value of AppId uniquely identifies this application. | ||
| ; Do not use the same AppId value in installers for other applications. | ||
| ; (To generate a new GUID, click Tools | Generate GUID inside the IDE.) | ||
| AppId={{4263A8D4-1068-45F9-A542-C340C4A22E8B} | ||
| AppName=R-Instat | ||
| #define AppVerName "0.56" | ||
| AppVersion={#AppVerName} | ||
| AppPublisher=African Maths Institute | ||
| AppPublisherURL=http://r-instat.org/ | ||
| AppSupportURL=http://r-instat.org/ | ||
| AppUpdatesURL=http://r-instat.org/ | ||
| DefaultDirName={autopf}\R-Instat\{#AppVerName} | ||
| DefaultGroupName=R-Instat | ||
| AllowNoIcons=yes | ||
| OutputBaseFilename=R-Instat_{#AppVerName}_Installer_64 | ||
| SetupIconFile=..\instat\Resources\rinstat_icon_Hih_icon.ico | ||
| Compression=lzma | ||
| SolidCompression=yes | ||
| ArchitecturesInstallIn64BitMode=x64 | ||
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| [Tasks] | ||
| Name: "desktopicon"; Description: "{cm:CreateDesktopIcon}"; GroupDescription: "{cm:AdditionalIcons}"; Flags: unchecked | ||
| Name: "quicklaunchicon"; Description: "{cm:CreateQuickLaunchIcon}"; GroupDescription: "{cm:AdditionalIcons}"; Flags: unchecked; OnlyBelowVersion: 0,6.1 | ||
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| [Files] | ||
| Source: "..\instat\bin\x64\Release\instat.exe"; DestDir: "{app}"; Flags: ignoreversion | ||
| Source: "..\instat\bin\x64\Release\*"; DestDir: "{app}"; Flags: ignoreversion recursesubdirs createallsubdirs | ||
| ; NOTE: Don't use "Flags: ignoreversion" on any shared system files | ||
|
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||
| [Icons] | ||
| Name: "{group}\R-Instat"; Filename: "{app}\instat.exe" | ||
| Name: "{group}\{cm:UninstallProgram,R-Instat}"; Filename: "{uninstallexe}" | ||
| Name: "{commondesktop}\R-Instat"; Filename: "{app}\instat.exe"; Tasks: desktopicon | ||
| Name: "{userappdata}\Microsoft\Internet Explorer\Quick Launch\R-Instat"; Filename: "{app}\instat.exe"; Tasks: quicklaunchicon | ||
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| [Run] | ||
| Filename: "{app}\instat.exe"; Description: "{cm:LaunchProgram,R-Instat}"; Flags: nowait postinstall skipifsilent |
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| install.packages("miniCRAN") | ||
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| core_pkgs <- c("reshape2", "lubridate","plyr", "dplyr", "rtf", "openxlsx", "ggplot2", | ||
| "extRemes", "GGally", "agridat", "FactoMineR", "plotrix", "candisc", "R6", | ||
| "openair", "circular", "survival", "Evapotranspiration", "clifro", "devtools", | ||
| "factoextra", "circlize", "CircStats", "gridExtra", "ggfortify", "rio", | ||
| "readxl", "lme4", "dummies", "ggthemes", "lazyeval", "stringr", "httr", | ||
| "jsonlite", "fitdistrplus", "visreg", "climdex.pcic", "mosaic", "ncdf4", | ||
| "getPass", "RMySQL", "DBI", "EnvStats", "signmedian.test", "sjPlot", | ||
| "sjmisc", "plotly", "svglite", "htmlTable", "rje", "tidyr", "faraway", | ||
| "ncdf.tools", "rrefine", "dae", "gapminder", "questionr", "nycflights13", | ||
| "Lahman", "RcppRoll", "cmsaf", "sjlabelled", "maptools", "RColorBrewer", | ||
| "colorRamps", "mapdata", "rworldmap", "rworldxtra", "e1071", "robustbase", | ||
| "wakefield", "Hmisc", "SPEI", "agricolae", "sf", "weathermetrics", | ||
| "geosphere", "ggmosaic", "readODS", "ggalt", "ggpmisc", "treemapify", | ||
| "hydroGOF", "hydroTSM", "verification", "DescTools", | ||
| "PCICt", "abind") # Added because of ncdf4.helpers | ||
| # You must unzip ncdf4.helpers folder into library folder manually | ||
| # Download from here https://drive.google.com/file/d/1UqwqVDxMvlHNocUa0i6uiGFT24zwGdgB/view?usp=sharing | ||
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| pkgList <- miniCRAN::pkgDep(core_pkgs, type = "win.binary", repos = "https://cran.rstudio.com/", | ||
| suggests = FALSE, includeBasePkgs = TRUE, Rversion = "3.6") | ||
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| install.packages(pkgList, lib = "../library", | ||
| repos = "https://cran.rstudio.com/") |
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