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HieuPhan33 committed Mar 31, 2024
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Expand Up @@ -211,11 +211,11 @@ pip install torch==1.12.0+cu113 torchvision==0.13.0+cu113 torchaudio==0.12.0 --e
pip install opencv-python==4.2.0.32
```

## LLM Disease's Visual Concept Generation
## 🤖 LLM Disease's Visual Concept Generation

The script to generate diseases' visual aspects using LLM - GPT can be found [here](Pretrain/concept_gen/concept_init.ipynb).

## Pre-train:
## 🔥 Pre-train:

<!-- Pre-train code will be released soon. Stay tuned. -->

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* COVIDx-CXR-2 - The [official link](https://github.com/lindawangg/COVID-Net/blob/master/docs/COVIDx.md) on Kaggle is down. The publicly available expanded version, called COVIDx-CXR4 is released [here](https://www.kaggle.com/datasets/andyczhao/covidx-cxr2). They encompass COVIDx-CXR-2 as subset. Please use our dataset csv splits to reproduce the results on COVIDx-CXR-2 subset version.
* Covid Rural - The [official link](https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=70226443) includes raw DICOM datasets. We use preprocessed data provided [here](https://github.com/haimingt/opacity_segmentation_covid_chest_X_ray/tree/master/covid_rural_annot).

## 🚀 Quick Start:
## 🌟 Quick Start:
Check this [link](Pretrain/data_file/DATA_Prepare.md) to download MAVL checkpoints. It can be used for all zero-shot && finetuning tasks

* **Zero-Shot Classification:**
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