Hdf5 merge issue 487 v110

.clang-format

@@ -7,6 +7,7 @@ AlignConsecutiveDeclarations: true
 AlignConsecutiveMacros: true
 #llvm10-11: AlignOperands:   true - Align
 #llvm11: AllowShortEnumsOnASingleLine: true
+AllowShortFunctionsOnASingleLine: None
 AlwaysBreakAfterReturnType: AllDefinitions
 # Can enable the following section when llvm 12.x is out
 #AttributeMacros:
@@ -32,6 +33,7 @@ BreakBeforeBraces: Stroustrup
 BreakAfterJavaFieldAnnotations: true
 BreakStringLiterals: true
 ColumnLimit:     110    # Update $max_trace_macro_line_len in bin/trace also
+ForEachMacros: ['ALL_MEMBERS', 'UNIQUE_MEMBERS']
 IncludeCategories:
   - Regex:           '^"(llvm|llvm-c|clang|clang-c)/'
     Priority:        3

bin/format_source

@@ -8,7 +8,7 @@
 #
 # (Remember to update both bin/format_source and bin/format_source_patch)
 
-find . -type d \( -path ./config \) -prune \
+find . \( -type d -path ./config -prune -and -not -path ./config \) \
     -or \( \( \! \( \
         -name H5LTanalyze.c \
         -or -name H5LTparse.c \

bin/format_source_patch

@@ -8,7 +8,7 @@
 #
 # (Remember to update both bin/format_source and bin/format_source_patch)
 
-find . -type d \( -path ./config \) -prune \
+find . \( -type d -path ./config -prune -and -not -path ./config \) \
     -or \( \( \! \( \
         -name H5LTanalyze.c \
         -or -name H5LTparse.c \

c++/src/H5AbstractDs.cpp

@@ -38,7 +38,9 @@ namespace H5 {
 ///\brief       Default constructor
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-AbstractDs::AbstractDs() {}
+AbstractDs::AbstractDs()
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    AbstractDs default constructor
@@ -331,6 +333,8 @@ AbstractDs::getVarLenType() const
 ///\brief       Noop destructor.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-AbstractDs::~AbstractDs() {}
+AbstractDs::~AbstractDs()
+{
+}
 
 } // namespace H5

c++/src/H5ArrayType.cpp

@@ -34,7 +34,9 @@ namespace H5 {
 ///\brief       Default constructor: Creates a stub ArrayType
 // Programmer   Binh-Minh Ribler - May 2004
 //--------------------------------------------------------------------------
-ArrayType::ArrayType() : DataType() {}
+ArrayType::ArrayType() : DataType()
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    ArrayType overloaded constructor
@@ -43,14 +45,18 @@ ArrayType::ArrayType() : DataType() {}
 ///\exception   H5::DataTypeIException
 // Programmer   Binh-Minh Ribler - May 2004
 //--------------------------------------------------------------------------
-ArrayType::ArrayType(const hid_t existing_id) : DataType(existing_id) {}
+ArrayType::ArrayType(const hid_t existing_id) : DataType(existing_id)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    ArrayType copy constructor
 ///\brief       Copy constructor: same HDF5 object as \a original
 // Programmer   Binh-Minh Ribler - May 2004
 //--------------------------------------------------------------------------
-ArrayType::ArrayType(const ArrayType &original) : DataType(original) {}
+ArrayType::ArrayType(const ArrayType &original) : DataType(original)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    ArrayType overloaded constructor
@@ -206,6 +212,8 @@ ArrayType::getArrayDims(hsize_t *dims) const
 ///\brief       Properly terminates access to this array datatype.
 // Programmer   Binh-Minh Ribler - May 2004
 //--------------------------------------------------------------------------
-ArrayType::~ArrayType() {}
+ArrayType::~ArrayType()
+{
+}
 
 } // namespace H5

c++/src/H5AtomType.cpp

@@ -35,7 +35,9 @@ namespace H5 {
 // Purpose      Default constructor: creates a stub atomic datatype.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-AtomType::AtomType() : DataType() {}
+AtomType::AtomType() : DataType()
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    AtomType overloaded constructor [protected]
@@ -44,14 +46,18 @@ AtomType::AtomType() : DataType() {}
 // Exception    H5::DataTypeIException
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-AtomType::AtomType(const hid_t existing_id) : DataType(existing_id) {}
+AtomType::AtomType(const hid_t existing_id) : DataType(existing_id)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    AtomType copy constructor
 ///\brief       Copy constructor: same HDF5 object as \a original
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-AtomType::AtomType(const AtomType &original) : DataType(original) {}
+AtomType::AtomType(const AtomType &original) : DataType(original)
+{
+}
 #endif // DOXYGEN_SHOULD_SKIP_THIS
 
 //--------------------------------------------------------------------------
@@ -290,7 +296,9 @@ AtomType::setPad(H5T_pad_t lsb, H5T_pad_t msb) const
 ///\brief       Noop destructor.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-AtomType::~AtomType() {}
+AtomType::~AtomType()
+{
+}
 #endif // DOXYGEN_SHOULD_SKIP_THIS
 
 } // namespace H5

c++/src/H5Attribute.cpp

@@ -44,7 +44,9 @@ class H5Object; // forward declaration for UserData4Aiterate
 ///\brief       Default constructor: Creates a stub attribute
 // Programmer   Binh-Minh Ribler - May, 2004
 //--------------------------------------------------------------------------
-Attribute::Attribute() : AbstractDs(), H5Location(), id(H5I_INVALID_HID) {}
+Attribute::Attribute() : AbstractDs(), H5Location(), id(H5I_INVALID_HID)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    Attribute copy constructor

c++/src/H5CommonFG.cpp

@@ -357,14 +357,18 @@ CommonFG::openVarLenType(const H5std_string &name) const
 ///\brief       Default constructor.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-CommonFG::CommonFG() {}
+CommonFG::CommonFG()
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    CommonFG destructor
 ///\brief       Noop destructor.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-CommonFG::~CommonFG() {}
+CommonFG::~CommonFG()
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    f_DataType_setId - friend

c++/src/H5CompType.cpp

@@ -37,23 +37,29 @@ namespace H5 {
 ///\brief       Default constructor: Creates a stub compound datatype
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-CompType::CompType() : DataType() {}
+CompType::CompType() : DataType()
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    CompType copy constructor
 ///\brief       Copy constructor: same HDF5 object as \a original
 ///\param       original - IN: Original CompType instance
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-CompType::CompType(const CompType &original) : DataType(original) {}
+CompType::CompType(const CompType &original) : DataType(original)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    CompType overloaded constructor
 ///\brief       Creates a CompType object using the id of an existing datatype.
 ///\param       existing_id - IN: Id of an existing compound datatype
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-CompType::CompType(const hid_t existing_id) : DataType(existing_id) {}
+CompType::CompType(const hid_t existing_id) : DataType(existing_id)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    CompType overloaded constructor
@@ -65,7 +71,9 @@ CompType::CompType(const hid_t existing_id) : DataType(existing_id) {}
 //              the compound datatype.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-CompType::CompType(size_t size) : DataType(H5T_COMPOUND, size) {}
+CompType::CompType(size_t size) : DataType(H5T_COMPOUND, size)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    CompType overloaded constructor
@@ -549,6 +557,8 @@ CompType::setSize(size_t size) const
 ///\brief       Properly terminates access to this compound datatype.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-CompType::~CompType() {}
+CompType::~CompType()
+{
+}
 
 } // namespace H5

c++/src/H5DaccProp.cpp

@@ -88,23 +88,29 @@ const DSetAccPropList &DSetAccPropList::DEFAULT = *getConstant();
 ///\brief       Default constructor: creates a stub dataset creation property list
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetAccPropList::DSetAccPropList() : LinkAccPropList(H5P_DATASET_ACCESS) {}
+DSetAccPropList::DSetAccPropList() : LinkAccPropList(H5P_DATASET_ACCESS)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    DSetAccPropList copy constructor
 ///\brief       Copy constructor: same HDF5 object as \a original
 ///             DSetAccPropList object
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetAccPropList::DSetAccPropList(const DSetAccPropList &orig) : LinkAccPropList(orig) {}
+DSetAccPropList::DSetAccPropList(const DSetAccPropList &orig) : LinkAccPropList(orig)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    DSetAccPropList overloaded constructor
 ///\brief       Creates a DSetAccPropList object using the id of an
 ///             existing dataset creation property list.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetAccPropList::DSetAccPropList(const hid_t plist_id) : LinkAccPropList(plist_id) {}
+DSetAccPropList::DSetAccPropList(const hid_t plist_id) : LinkAccPropList(plist_id)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    DSetAccPropList::setChunkCache
@@ -159,6 +165,8 @@ DSetAccPropList::getChunkCache(size_t &rdcc_nslots, size_t &rdcc_nbytes, double
 ///\brief       Noop destructor.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetAccPropList::~DSetAccPropList() {}
+DSetAccPropList::~DSetAccPropList()
+{
+}
 
 } // namespace H5

c++/src/H5DataSet.cpp

@@ -44,7 +44,9 @@ using std::endl;
 ///\brief       Default constructor: creates a stub DataSet.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DataSet::DataSet() : H5Object(), AbstractDs(), id(H5I_INVALID_HID) {}
+DataSet::DataSet() : H5Object(), AbstractDs(), id(H5I_INVALID_HID)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    DataSet overloaded constructor

c++/src/H5DataType.cpp

@@ -46,7 +46,9 @@ using std::endl;
 ///\brief       Default constructor: Creates a stub datatype
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DataType::DataType() : H5Object(), id(H5I_INVALID_HID), encoded_buf(NULL), buf_size(0) {}
+DataType::DataType() : H5Object(), id(H5I_INVALID_HID), encoded_buf(NULL), buf_size(0)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    DataType overloaded constructor

c++/src/H5DcreatProp.cpp

@@ -94,23 +94,29 @@ const DSetCreatPropList &DSetCreatPropList::DEFAULT = *getConstant();
 ///\brief       Default constructor: creates a stub dataset creation property list
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetCreatPropList::DSetCreatPropList() : ObjCreatPropList(H5P_DATASET_CREATE) {}
+DSetCreatPropList::DSetCreatPropList() : ObjCreatPropList(H5P_DATASET_CREATE)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    DSetCreatPropList copy constructor
 ///\brief       Copy constructor: same HDF5 object as \a original
 ///             DSetCreatPropList object
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetCreatPropList::DSetCreatPropList(const DSetCreatPropList &orig) : ObjCreatPropList(orig) {}
+DSetCreatPropList::DSetCreatPropList(const DSetCreatPropList &orig) : ObjCreatPropList(orig)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    DSetCreatPropList overloaded constructor
 ///\brief       Creates a DSetCreatPropList object using the id of an
 ///             existing dataset creation property list.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetCreatPropList::DSetCreatPropList(const hid_t plist_id) : ObjCreatPropList(plist_id) {}
+DSetCreatPropList::DSetCreatPropList(const hid_t plist_id) : ObjCreatPropList(plist_id)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    DSetCreatPropList::setChunk
@@ -780,6 +786,8 @@ DSetCreatPropList::setVirtual(const DataSpace &vspace, const H5std_string &src_f
 ///\brief       Noop destructor.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetCreatPropList::~DSetCreatPropList() {}
+DSetCreatPropList::~DSetCreatPropList()
+{
+}
 
 } // namespace H5

c++/src/H5DxferProp.cpp

@@ -89,7 +89,9 @@ const DSetMemXferPropList &DSetMemXferPropList::DEFAULT = *getConstant();
 ///             transfer property list object.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetMemXferPropList::DSetMemXferPropList() : PropList(H5P_DATASET_XFER) {}
+DSetMemXferPropList::DSetMemXferPropList() : PropList(H5P_DATASET_XFER)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function     DSetMemXferPropList constructor
@@ -110,7 +112,9 @@ DSetMemXferPropList::DSetMemXferPropList(const char *exp) : PropList(H5P_DATASET
 ///                            list object to copy
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetMemXferPropList::DSetMemXferPropList(const DSetMemXferPropList &original) : PropList(original) {}
+DSetMemXferPropList::DSetMemXferPropList(const DSetMemXferPropList &original) : PropList(original)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function     DSetMemXferPropList overloaded constructor
@@ -120,7 +124,9 @@ DSetMemXferPropList::DSetMemXferPropList(const DSetMemXferPropList &original) :
 ///                            property list
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetMemXferPropList::DSetMemXferPropList(const hid_t plist_id) : PropList(plist_id) {}
+DSetMemXferPropList::DSetMemXferPropList(const hid_t plist_id) : PropList(plist_id)
+{
+}
 
 //--------------------------------------------------------------------------
 // Function:    DSetMemXferPropList::setBuffer
@@ -552,6 +558,8 @@ DSetMemXferPropList::getEDCCheck() const
 ///\brief       Noop destructor.
 // Programmer   Binh-Minh Ribler - 2000
 //--------------------------------------------------------------------------
-DSetMemXferPropList::~DSetMemXferPropList() {}
+DSetMemXferPropList::~DSetMemXferPropList()
+{
+}
 
 } // namespace H5