Update to SuiteSparse:GraphBLAS 9.3.1 (the latest) #153
Workflow file for this run
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| name: Python wheel package build and publish | |
| on: | |
| release: | |
| types: [published] | |
| # Enable Run Workflow button in GitHub UI | |
| workflow_dispatch: | |
| inputs: | |
| # Manual dispatch allows optional upload of wheels to PyPI | |
| upload_dest: | |
| type: choice | |
| description: Upload wheels to | |
| options: | |
| - No Upload | |
| - PyPI | |
| - Test PyPI | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| permissions: | |
| # For PyPI Trusted Publisher | |
| id-token: write | |
| jobs: | |
| build_sdist: | |
| name: Build SDist | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Build SDist | |
| run: pipx run build --sdist | |
| - name: Check metadata | |
| run: pipx run twine check dist/* | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: sdist | |
| path: dist/*.tar.gz | |
| build_wheels: | |
| name: Wheels - ${{ matrix.cibw_archs }} ${{ matrix.arch_note}} - ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - os: windows-latest | |
| cibw_archs: "auto64" | |
| # Linux x86 manylinux | |
| - os: ubuntu-latest | |
| cibw_archs: "x86_64" | |
| # Python 3.12 wheel requires libffi-devel to be installed. manylinux container uses yum | |
| cibw_before_build_linux: "yum install -y libffi-devel" | |
| # skip musllinux | |
| cibw_skip: "*musl*" | |
| # Linux x86 musllinux | |
| # Separate runner for a Musl build of graphblas. The glibc build is not guaranteed to be compatible. | |
| - os: ubuntu-latest | |
| cibw_archs: "x86_64" | |
| arch_note: "musl" | |
| # skip manylinux (built elsewhere), PyPy (no musl numpy wheels), CPython 3.8 (no musl numpy wheels) | |
| cibw_skip: "*many* pp* cp38*" | |
| # Linux aarch64 | |
| # Separate runner because this requires emulation (only x86 runners are available) and is very slow. | |
| - os: ubuntu-latest | |
| cibw_archs: "aarch64" | |
| # numpy wheels not available for aarch64 PyPy or musllinux | |
| cibw_skip: "pp* *musl*" | |
| # macOS x86 | |
| # Note: keep as old as possible as due to libomp this will be the oldest supported macOS version. | |
| - os: macos-12 | |
| cibw_archs: "x86_64" | |
| # macOS Apple Silicon | |
| # Note: keep as old as possible as due to libomp this will be the oldest supported macOS version. | |
| - os: macos-14 | |
| cibw_archs: "arm64" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| # aarch64 Linux builds are cross-compiled on x86 runners using emulation | |
| # see https://cibuildwheel.readthedocs.io/en/stable/faq/#emulation | |
| - name: Setup QEMU (for aarch64) | |
| if: matrix.cibw_archs == 'aarch64' | |
| uses: docker/setup-qemu-action@v3 | |
| with: | |
| platforms: arm64 | |
| - name: Setup env (for aarch64) | |
| if: matrix.cibw_archs == 'aarch64' | |
| # Ask suitesparse.sh to compile faster by optimizing fewer types. Otherwise, the build takes too long to finish | |
| # in 6 hour limit. | |
| run: | | |
| echo "SUITESPARSE_FAST_BUILD=1" >> $GITHUB_ENV | |
| - name: Setup for testing | |
| if: github.event_name == 'push' || github.event_name == 'pull_request' | |
| # Ask suitesparse.sh to compile in the fastest way possible and provide a GB version to build | |
| run: | | |
| echo "SUITESPARSE_FASTEST_BUILD=1" >> $GITHUB_ENV | |
| shell: bash | |
| - name: Setup GraphBLAS version from GB_VERSION.txt | |
| # Use GraphBLAS version specified in GB_VERSION.txt unless specified in a git tag (next workflow step). | |
| # Git tag method required for uploads to PyPI. | |
| if: github.event_name != 'release' && github.event.inputs.upload_dest != 'PyPI' | |
| run: echo "GB_VERSION_REF=refs/tags/$(cat GB_VERSION.txt).0" >> $GITHUB_ENV | |
| shell: bash | |
| - name: Setup GraphBLAS version from git tag | |
| if: ${{ startsWith(github.ref, 'refs/tags/') }} | |
| # If this is a tagged ref, like a release, then use the tag for the graphblas version | |
| run: echo "GB_VERSION_REF=${{ github.ref }}" >> $GITHUB_ENV | |
| shell: bash | |
| - name: Install tools (macOS) | |
| if: contains(matrix.os, 'macos') | |
| # Install coreutils which includes `nproc` used by `make -j` in suitesparse.sh | |
| # | |
| # Explicitly install libomp to be clear about the dependency. | |
| # | |
| # libomp determines the minimum macOS version that we can build for | |
| run: | | |
| brew fetch --retry coreutils && brew install coreutils | |
| brew fetch --retry libomp && brew reinstall libomp | |
| echo MACOSX_DEPLOYMENT_TARGET=$(otool -l $(brew --prefix libomp)/lib/libomp.dylib | grep minos | awk '{print $2}') >> $GITHUB_ENV | |
| - uses: pypa/[email protected] | |
| with: | |
| output-dir: wheelhouse | |
| env: | |
| # very verbose | |
| CIBW_BUILD_VERBOSITY: 3 | |
| # Build SuiteSparse | |
| CIBW_BEFORE_ALL: bash suitesparse.sh ${{ env.GB_VERSION_REF }} | |
| CIBW_BEFORE_BUILD_LINUX: ${{ matrix.cibw_before_build_linux }} | |
| CIBW_ENVIRONMENT_PASS_LINUX: SUITESPARSE_FAST_BUILD SUITESPARSE_FASTEST_BUILD | |
| # CMAKE_GNUtoMS=ON asks suitesparse.sh to build libraries in MSVC style on Windows. | |
| CIBW_ENVIRONMENT_WINDOWS: CMAKE_GNUtoMS=ON GRAPHBLAS_PREFIX="C:/GraphBLAS" | |
| # macOS libomp requires special configs. BREW_LIBOMP=1 asks suitesparse.sh to include them. | |
| # SUITESPARSE_MACOS_ARCH asks to build a particular architecture. Either x86 or arm64. | |
| CIBW_ENVIRONMENT_MACOS: BREW_LIBOMP="1" SUITESPARSE_MACOS_ARCH=${{ matrix.cibw_archs }} | |
| # Uncomment to only build CPython wheels | |
| # CIBW_BUILD: "cp*" | |
| # Architectures to build specified in matrix | |
| CIBW_ARCHS: ${{ matrix.cibw_archs }} | |
| # as of writing numpy does not support pypy 3.10 | |
| CIBW_SKIP: "${{ matrix.cibw_skip }} pp310*" | |
| # Use delvewheel on Windows. | |
| # This copies graphblas.dll into the wheel. "repair" in cibuildwheel parlance includes copying any shared | |
| # libraries from the build host into the wheel to make the wheel self-contained. | |
| # Cibuildwheel includes tools for this for Linux and macOS, and they recommend delvewheel for Windows. | |
| # Note: Currently using a workaround: --no-mangle instead of stripping graphblas.dll | |
| # see https://github.com/adang1345/delvewheel/issues/33 | |
| CIBW_BEFORE_BUILD_WINDOWS: "pip install delvewheel" | |
| CIBW_REPAIR_WHEEL_COMMAND_WINDOWS: "delvewheel repair --add-path \"C:\\GraphBLAS\\bin\" --no-mangle \"libgomp-1.dll;libgcc_s_seh-1.dll\" -w {dest_dir} {wheel}" | |
| # make cibuildwheel install test dependencies from pyproject.toml | |
| CIBW_TEST_EXTRAS: "test" | |
| # run tests | |
| CIBW_TEST_COMMAND: "pytest --pyargs suitesparse_graphblas -s -k test_print_jit_config && pytest -v --pyargs suitesparse_graphblas" | |
| CIBW_TEST_SKIP: ${{ matrix.cibw_test_skip }} | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: wheels-${{ matrix.os }}-${{ matrix.cibw_archs }}${{ matrix.arch_note}} | |
| path: wheelhouse/*.whl | |
| if-no-files-found: error | |
| upload_all: | |
| name: Upload to PyPI | |
| needs: [build_wheels, build_sdist] | |
| runs-on: ubuntu-latest | |
| # only upload releases to PyPI | |
| if: github.repository == 'GraphBLAS/python-suitesparse-graphblas' && ((github.event_name == 'release' && github.event.action == 'published') || (github.event_name == 'workflow_dispatch' && github.event.inputs.upload_dest != 'No Upload')) | |
| steps: | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.x" | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| path: dist | |
| merge-multiple: true | |
| # Upload to PyPI | |
| - uses: pypa/gh-action-pypi-publish@release/v1 | |
| name: Upload to PyPI | |
| if: github.event_name == 'release' || (github.event_name == 'workflow_dispatch' && github.event.inputs.upload_dest == 'PyPI') | |
| with: | |
| # PyPI does not allow replacing a file. Without this flag the entire action fails if even a single duplicate exists. | |
| skip-existing: true | |
| verbose: true | |
| password: ${{ secrets.PYPI_TOKEN }} | |
| # Upload to Test PyPI | |
| - uses: pypa/gh-action-pypi-publish@release/v1 | |
| name: Upload to Test PyPI | |
| if: github.event_name == 'workflow_dispatch' && github.event.inputs.upload_dest == 'Test PyPI' | |
| with: | |
| # PyPI does not allow replacing a file. Without this flag the entire action fails if even a single duplicate exists. | |
| skip-existing: true | |
| verbose: true | |
| repository-url: https://test.pypi.org/legacy/ |