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Query with . no longer searches for unmutated #938

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corneliusroemer opened this issue Mar 4, 2024 · 3 comments
Closed

Query with . no longer searches for unmutated #938

corneliusroemer opened this issue Mar 4, 2024 · 3 comments
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@JonasKellerer
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@corneliusroemer
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Before the recent LAPIS changes, when querying for something like 23271. it showed all sequences that had 23271 genotype of reference/unmutated.

This no longer seems to be the case. I get almost nothing for 23271. but lots for 23271C (C being reference):

https://cov-spectrum.org/explore/World/AllSamples/Past3M/variants?nucMutations=23271C&:
image

https://cov-spectrum.org/explore/World/AllSamples/Past3M/variants?nucMutations=23271.&:
image
@chaoran-chen chaoran-chen added the bug Something isn't working label Mar 4, 2024
@JonasKellerer JonasKellerer self-assigned this Mar 5, 2024
JonasKellerer added a commit to GenSpectrum/LAPIS-SILO that referenced this issue Mar 5, 2024
@JonasKellerer
fix: nucleotide symbol equals with dot
db2d408 
From GenSpectrum/cov-spectrum-website#938
@JonasKellerer JonasKellerer mentioned this issue Mar 5, 2024
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JonasKellerer added a commit to GenSpectrum/LAPIS-SILO that referenced this issue Mar 5, 2024
@JonasKellerer
fix: nucleotide symbol equals with dot
855a492 
From GenSpectrum/cov-spectrum-website#938
@JonasKellerer
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This should be fixed by GenSpectrum/LAPIS-SILO#341 .

JonasKellerer added a commit to GenSpectrum/LAPIS-SILO that referenced this issue Mar 5, 2024
@JonasKellerer
fix: nucleotide symbol equals with dot
42ac7ce 
From GenSpectrum/cov-spectrum-website#938
JonasKellerer added a commit to GenSpectrum/LAPIS-SILO that referenced this issue Mar 5, 2024
@JonasKellerer
fix: nucleotide symbol equals with dot
6ad623e 
From GenSpectrum/cov-spectrum-website#938
@JonasKellerer
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GenSpectrum/LAPIS-SILO#341 is merged.
Lets wait for the next update of SILO for production. Then we can check again and hopefully close this.

@JonasKellerer
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After restart both urls you provided show the same count. So I close this issue.

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@chaoran-chen @corneliusroemer @JonasKellerer