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make it possible to return sequences as JSON or NDJSON #971
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fengelniederhammer
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It seems the default is now no longer FASTA? See loculus-project/loculus#3077 (comment) |
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AFAICS the issue has been resolved in Loculus? |
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Currently, the sequences endpoints only return FASTA, which is nice for downloading files. But when working with LAPIS programmatically, a structured response would be better.
Implement getting the sequences as JSON or NDJSON (or both, if easily possible). The default should still be FASTA.
Make sure that the result can still be streamed properly.
[
, then NDJSON lines separated by,
and then]
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