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Fetal brain MRI surface extraction pipeline using CIVET marching-cubes from NIFTI images + QC

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FNNDSC/Fetal_Brain_MRI_Surface_Extraction_Pipeline

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Fetal Brain MRI Surface Extraction ChRIS Pipeline

DAG

Abstract

This pipeline does preprocessing and QC around pl-fetal-cp-surface-extract.

Notes

Create the figure by running

snakemake --dag extract_outersp_surface_figures fit_innersp_surface_figures | dot -Tsvg > dag.svg

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Fetal brain MRI surface extraction pipeline using CIVET marching-cubes from NIFTI images + QC

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