added busco dataset param #27
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name: Docs | |
on: [push, pull_request, workflow_dispatch] | |
permissions: | |
contents: write | |
jobs: | |
docs: | |
runs-on: ubuntu-latest | |
steps: | |
- name: Checkout Repository | |
uses: actions/checkout@v2 | |
- name: Set up Python | |
uses: actions/setup-python@v2 | |
with: | |
python-version: 3.9 | |
- name: Install Dependencies | |
run: | | |
pip install -e. | |
pip install sphinx sphinx_rtd_theme | |
- name: Sphinx Build | |
run: | | |
sphinx-build -b html docs/source docs/build | |
sphinx-build docs/source -W -b linkcheck -d docs/build/doctrees docs/build/html | |
- name: Deploy to GitHub Pages | |
uses: peaceiris/actions-gh-pages@v3 | |
if: ${{ github.event_name == 'push' && github.ref == 'refs/heads/nextflow_pipe' }} | |
with: | |
publish_branch: gh-pages | |
github_token: ${{ secrets.GITHUB_TOKEN }} | |
publish_dir: docs/build | |
force_orphan: true |