Start reordering the ispyb service #274
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: Build and test | |
on: [push, pull_request] | |
permissions: | |
contents: read | |
jobs: | |
build: | |
name: Build package | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python 3.11 | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.11" | |
- name: Install pypa/build | |
run: >- | |
python3 -m | |
pip install | |
build | |
--user | |
- name: Build python package | |
run: python3 -m build | |
test: | |
name: Build distribution and run tests | |
runs-on: ubuntu-latest | |
needs: | |
- build | |
strategy: | |
matrix: | |
python-version: ["3.10", "3.11", "3.12"] | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
pip install pytest pytest-cov pytest-mock pytest-datafiles | |
pip install . | |
- name: Install fork of CCP-EM pipeliner | |
run: | | |
git clone -b diamond_tomo --single-branch https://gitlab.com/stephen-riggs/ccpem-pipeliner.git | |
pip install ./ccpem-pipeliner | |
- name: Test with pytest | |
run: | | |
PYTHONDEVMODE=1 pytest -v -ra --cov=cryoemservices --cov-report=xml --cov-branch tests | |
- name: Upload to Codecov | |
uses: codecov/codecov-action@v4 | |
with: | |
name: ${{ matrix.python-version }} | |
files: coverage.xml | |
env: | |
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | |
continue-on-error: true | |
timeout-minutes: 2 |